RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 E7ESA3 106 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 PRPSAP2O60256 369 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 PEX10O60683 326 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 OXSR1O95747 527 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 ITGBL1O95965 494 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 CLPTM1O96005 669 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 DHRS4L1P0CG22 281 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 CSH1P0DML2 217 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 CSH2P0DML3 217 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 PDGFRAP16234 1089 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 RGS7P49802 495 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 ACTR3P61158 418 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 TGFB2P61812 414 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 YWHAZP63104 245 aaKnown RBP8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 CLDN10P78369 228 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 TAP1Q03518 808 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 GRM2Q14416 872 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 CCDC142Q17RM4 750 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 C6orf183Q5T699 404 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 VWA5B1Q5TIE3 1220 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 PPP1R2P3Q6NXS1 205 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 RSBN1LQ6PCB5 846 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 WDR75Q8IWA0 830 aaKnown RBP8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 GIPC3Q8TF64 312 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 HEXIM2Q96MH2 286 aaKnown RBP8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 NLRP4Q96MN2 994 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 XAB2Q9HCS7 855 aaKnown RBP8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 TRPC7Q9HCX4 862 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 SMYD2Q9NRG4 433 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 SELENONQ9NZV5 590 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 NFASCO94856 1347 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 CNTNAP1P78357 1384 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 INO80B-WBP1J3KQ70 363 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 GJB1P08034 283 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 F7P08709 466 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 GRIA1P42261 906 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 BCAR1P56945 870 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 YWHAEP62258 255 aaKnown RBP8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 SP2Q02086 613 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 SLC18A2Q05940 514 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 MMEL1Q495T6 779 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 KCTD21Q4G0X4 260 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 DNAL1Q4LDG9 190 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 PRAMEF18Q5VWM3 479 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 NET1Q7Z628 596 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 PEX5LQ8IYB4 626 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 MPP5Q8N3R9 675 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 RNF149Q8NC42 400 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 OR6Y1Q8NGX8 325 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 PRICKLE1Q96MT3 831 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 PHF12Q96QT6 1004 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 INO80BQ9C086 356 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 PORCNQ9H237 461 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 IFT122Q9HBG6 1241 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 KIAA1522Q9P206 1035 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 HMGXB4Q9UGU5 601 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 SOX13Q9UN79 622 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 DOLKQ9UPQ8 538 aa8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 APOBEC2Q9Y235 224 aaKnown RBP8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 GPC6Q9Y625 555 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE1-201ENST00000357235 TCRBV5S1A1TA0A578 114 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 VWA5AO00534 786 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 ITM2AO43736 263 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 MAGEC1O60732 1142 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 PLA2G6O60733 806 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 TRMUO75648 421 aaKnown RBP8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 STBD1O95210 358 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 HMGCRP04035 888 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 PEX2P28328 305 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 STIP1P31948 543 aaKnown RBP8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 NAMPTP43490 491 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 RXRGP48443 463 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 TRPC1P48995 793 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 CHN2P52757 468 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 FKBP1AP62942 108 aaKnown RBP8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 CAPSQ13938 189 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 HNRNPDQ14103 355 aaKnown RBP8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 SPDYE2Q495Y8 402 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 FASTKD1Q53R41 847 aaKnown RBP8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 EFHC1Q5JVL4 640 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 WDR78Q5VTH9 848 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 GPRASP2Q96D09 838 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 PIWIL1Q96J94 861 aaKnown RBP8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 PEBP4Q96S96 227 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 NDEL1Q9GZM8 345 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 KLC2Q9H0B6 622 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 RSAD1Q9HA92 442 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 ACSS2Q9NR19 701 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 MAN1C1Q9NR34 630 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 CNTN3Q9P232 1028 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 FETUBQ9UGM5 382 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 ITM2BQ9Y287 266 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 DYTNA2CJ06 578 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 CAPN14A8MX76 684 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 TNNC2P02585 160 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 SUPT20HL2P0C7V6 817 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 MSX2P35548 267 aaPredicted RBP8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 RAP1GDS1P52306 607 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms