RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 STOX1Q6ZVD7 989 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 SH3BP5LQ7L8J4 393 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 HEMGNQ9BXL5 484 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 NEK6Q9HC98 313 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 AGPAT3Q9NRZ7 376 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 CROTQ9UKG9 612 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 CEMIPQ8WUJ3 1361 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 GSG1L2A8MUP6 293 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 RAD51BO15315 384 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 HMGCRP04035 888 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 BCAT1P54687 386 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 POU5F1BQ06416 359 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 PRKG1Q13976 671 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 FAM189A2Q15884 450 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 IER5Q5VY09 327 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 HPS1Q92902 700 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 ROPN1LQ96C74 230 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 GPRASP2Q96D09 838 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 FAM84AQ96KN4 292 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 BCL7BQ9BQE9 202 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 MLXIPLQ9NP71 852 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 LMCD1Q9NZU5 365 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 C2orf81A6NN90 581 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 HDAC3O15379 428 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 PLEKHA8P1O95397 391 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 FAUP35544 74 aaKnown RBP6.73□□□□□ -1.33
VPS13B-202ENST00000357162 TUFMP49411 452 aaKnown RBP6.73□□□□□ -1.33
VPS13B-202ENST00000357162 PKN3Q6P5Z2 889 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 DNAAF5Q86Y56 855 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 RNF25Q96BH1 459 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-202ENST00000357162 FAM111AQ96PZ2 611 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 TMX2Q9Y320 296 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 KITP10721 976 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 TMEM44Q2T9K0 475 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 ARHGAP17Q68EM7 881 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 SPAG16Q8N0X2 631 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 TRPV1Q8NER1 839 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 FBXO25Q8TCJ0 367 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 EDC3Q96F86 508 aaKnown RBP6.73□□□□□ -1.33
VPS13B-202ENST00000357162 RCOR3Q9P2K3 495 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-202ENST00000357162 NXF1Q9UBU9 619 aaKnown RBP6.73□□□□□ -1.33
VPS13B-202ENST00000357162 NACAE9PAV3 2078 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 DDX39AO00148 427 aaKnown RBP6.73□□□□□ -1.33
VPS13B-202ENST00000357162 HAT1O14929 419 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 MDM4O15151 490 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 RTP1P59025 263 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 NR1D2Q14995 579 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 HERC3Q15034 1050 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 C4orf33Q8N1A6 199 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 ZNF75CPQ92670 426 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-202ENST00000357162 RNFT2Q96EX2 444 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 ZFP42Q96MM3 310 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 AP5M1Q9H0R1 490 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 DHX35Q9H5Z1 703 aaKnown RBP6.73□□□□□ -1.33
VPS13B-202ENST00000357162 ADPRHL2Q9NX46 363 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 KLHL28Q9NXS3 571 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 TRPM5Q9NZQ8 1165 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 VPS51Q9UID3 782 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 ZNF180Q9UJW8 692 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 VANGL2Q9ULK5 521 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 DEPDC5O75140 1603 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 PDPK2PQ6A1A2 396 aa6.73□□□□□ -1.33
VPS13B-202ENST00000357162 C12orf50Q8NA57 414 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-202ENST00000357162 LOC110117498-PIK3R3F6TDL0 507 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 IDH3BO43837 385 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 DCAF6Q58WW2 860 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 SNAP47Q5SQN1 464 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 C4orf50Q6ZRC1 276 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 PIK3R3Q92569 461 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 EHD4Q9H223 541 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 SLC12A4Q9UP95 1085 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 GAKO14976 1311 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 RGS5O15539 181 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 MFN2O95140 757 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 UBTFL6P0CB48 400 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 ZNF618Q5T7W0 954 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 PEX5LQ8IYB4 626 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 SYTL5Q8TDW5 730 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 RPRD1BQ9NQG5 326 aaKnown RBP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 ERGIC3Q9Y282 383 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 CPS1P31327 1500 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 FAM92AA1XBS5 289 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 CLDN25C9JDP6 229 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 SNPHO15079 494 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 MPP3Q13368 585 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 THOC7Q6I9Y2 204 aaKnown RBP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 ATL1Q8WXF7 558 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 RNF145Q96MT1 663 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 MARCOQ9UEW3 520 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 PCDHA6Q9UN73 950 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 PCDHA8Q9Y5H6 950 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 CD58P19256 250 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 YWHABP31946 246 aaKnown RBP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 NEK3P51956 506 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 AIF1P55008 147 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 PPP4CP60510 307 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 CDH17Q12864 832 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 ACAP2Q15057 778 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 SPICE1Q8N0Z3 855 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 C9orf72Q96LT7 481 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms