RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 RAB6CQ9H0N0 254 aa19.46■□□□□ 0.71
PRPF39-201ENST00000355765 DNAJC28Q9NX36 388 aa19.46■□□□□ 0.71
PRPF39-201ENST00000355765 AGO2Q9UKV8 859 aaKnown RBP19.46■□□□□ 0.71
PRPF39-201ENST00000355765 CLEC11AQ9Y240 323 aa19.46■□□□□ 0.71
PRPF39-201ENST00000355765 G3V3G9 751 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 NFIBO00712 420 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 SERPINE1P05121 402 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 EPHA3P29320 983 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 MIPP30301 263 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 MRPS9P82933 396 aaKnown RBP19.45■□□□□ 0.7
PRPF39-201ENST00000355765 PTPN20Q4JDL3 420 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 DCAF8Q5TAQ9 597 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 PTAR1Q7Z6K3 402 aaPredicted RBP19.45■□□□□ 0.7
PRPF39-201ENST00000355765 UBR7Q8N806 425 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 GSDMBQ8TAX9 411 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 ADAM32Q8TC27 787 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 SEMA6AQ9H2E6 1030 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 ACSS2Q9NR19 701 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 RNF11Q9Y3C5 154 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 HEY1Q9Y5J3 304 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 STX16-NPEPL1H3BU86 382 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 TPP1O14773 563 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 LYPLA2O95372 231 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 MYCLP12524 364 aaPredicted RBP19.45■□□□□ 0.7
PRPF39-201ENST00000355765 EIF2AK2P19525 551 aaKnown RBP19.45■□□□□ 0.7
PRPF39-201ENST00000355765 ALDH1B1P30837 517 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 CDH15P55291 814 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 PPP2R5DQ14738 602 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 PPM1JQ5JR12 505 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 DENND1BQ6P3S1 775 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 ANKRD23Q86SG2 305 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 SNX32Q86XE0 403 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 STN1Q9H668 368 aaKnown RBP19.45■□□□□ 0.7
PRPF39-201ENST00000355765 TUT1Q9H6E5 874 aaKnown RBP19.45■□□□□ 0.7
PRPF39-201ENST00000355765 ZNF358Q9NW07 568 aa19.45■□□□□ 0.7
PRPF39-201ENST00000355765 SH3PXD2BA1X283 911 aa19.44■□□□□ 0.7
PRPF39-201ENST00000355765 TRIM43BA6NCK2 446 aa19.44■□□□□ 0.7
PRPF39-201ENST00000355765 TRDMT1O14717 391 aaKnown RBP19.44■□□□□ 0.7
PRPF39-201ENST00000355765 PLIN3O60664 434 aa19.44■□□□□ 0.7
PRPF39-201ENST00000355765 CST3P01034 146 aaPredicted RBP19.44■□□□□ 0.7
PRPF39-201ENST00000355765 COL6A2P12110 1019 aa19.44■□□□□ 0.7
PRPF39-201ENST00000355765 TBXAS1P24557 533 aaPredicted RBP19.44■□□□□ 0.7
PRPF39-201ENST00000355765 RPL10P27635 214 aaKnown RBP19.44■□□□□ 0.7
PRPF39-201ENST00000355765 RBL1P28749 1068 aa19.44■□□□□ 0.7
PRPF39-201ENST00000355765 GRIA1P42261 906 aa19.44■□□□□ 0.7
PRPF39-201ENST00000355765 SLC10A2Q12908 348 aaPredicted RBP19.44■□□□□ 0.7
PRPF39-201ENST00000355765 FAM156AQ8NDB6 213 aa19.44■□□□□ 0.7
PRPF39-201ENST00000355765 ADCY4Q8NFM4 1077 aa19.44■□□□□ 0.7
PRPF39-201ENST00000355765 MAPK15Q8TD08 544 aa19.44■□□□□ 0.7
PRPF39-201ENST00000355765 CNKSR2Q8WXI2 1034 aa19.44■□□□□ 0.7
PRPF39-201ENST00000355765 SLC35B4Q969S0 331 aa19.44■□□□□ 0.7
PRPF39-201ENST00000355765 RTKNQ9BST9 563 aa19.44■□□□□ 0.7
PRPF39-201ENST00000355765 COG4Q9H9E3 785 aa19.44■□□□□ 0.7
PRPF39-201ENST00000355765 TMX2-CTNND1H3BSU7 103 aa19.44■□□□□ 0.7
PRPF39-201ENST00000355765 NEMP1O14524 444 aa19.44■□□□□ 0.7
PRPF39-201ENST00000355765 FGFR3P22607 806 aa19.44■□□□□ 0.7
PRPF39-201ENST00000355765 CDK9P50750 372 aaKnown RBP19.44■□□□□ 0.7
PRPF39-201ENST00000355765 CDH6P55285 790 aa19.44■□□□□ 0.7
PRPF39-201ENST00000355765 PSMC1P62191 440 aaKnown RBP19.44■□□□□ 0.7
PRPF39-201ENST00000355765 SP4Q02446 784 aa19.44■□□□□ 0.7
PRPF39-201ENST00000355765 PDE1CQ14123 709 aaPredicted RBP19.44■□□□□ 0.7
PRPF39-201ENST00000355765 USP41Q3LFD5 358 aa19.44■□□□□ 0.7
PRPF39-201ENST00000355765 SAMD3Q8N6K7 520 aa19.44■□□□□ 0.7
PRPF39-201ENST00000355765 ZSCAN18Q8TBC5 510 aaPredicted RBP19.44■□□□□ 0.7
PRPF39-201ENST00000355765 KBTBD7Q8WVZ9 684 aa19.44■□□□□ 0.7
PRPF39-201ENST00000355765 GFM2Q969S9 779 aaKnown RBP19.44■□□□□ 0.7
PRPF39-201ENST00000355765 OR52B2Q96RD2 323 aa19.44■□□□□ 0.7
PRPF39-201ENST00000355765 AMHP03971 560 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 ALDOAP04075 364 aaKnown RBP19.43■□□□□ 0.7
PRPF39-201ENST00000355765 ENO3P13929 434 aaPredicted RBP19.43■□□□□ 0.7
PRPF39-201ENST00000355765 ZNF132P52740 706 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 PRKG1Q13976 671 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 NOMO1Q15155 1222 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 TAZQ16635 292 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 SH3PXD2AQ5TCZ1 1133 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 PPP1R2P3Q6NXS1 205 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 ALDH16A1Q8IZ83 802 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 MOCOSQ96EN8 888 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 PLGRKTQ9HBL7 147 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 PIH1D1Q9NWS0 290 aaKnown RBP19.43■□□□□ 0.7
PRPF39-201ENST00000355765 CYTH4Q9UIA0 394 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 CNTN6Q9UQ52 1028 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 FAM159BA6NKW6 160 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 FAM189A1O60320 539 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 BBOX1O75936 387 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 STAMBPO95630 424 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 ACAT1P24752 427 aaKnown RBP19.43■□□□□ 0.7
PRPF39-201ENST00000355765 NDST2P52849 883 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 ABCE1P61221 599 aaKnown RBP19.43■□□□□ 0.7
PRPF39-201ENST00000355765 CLDN10P78369 228 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 CRADDP78560 199 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 TAP1Q03518 808 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 CRY2Q49AN0 593 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 ELMSAN1Q6PJG2 1045 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 PACS1Q6VY07 963 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 DSELQ8IZU8 1212 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 ZNF781Q8N8C0 355 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 CATSPER1Q8NEC5 780 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 KLHL32Q96NJ5 620 aa19.43■□□□□ 0.7
PRPF39-201ENST00000355765 DHX33Q9H6R0 707 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms