RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 EIF3EP60228 445 aaKnown RBP9.67□□□□□ -0.86
SMG6-202ENST00000354901 RELAQ04206 551 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 OGFOD2Q6N063 350 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 ZBTB8OSQ8IWT0 167 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 CTAGE3PQ8IX95 158 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 LRRC43Q8N309 656 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 TCP10LQ8TDR4 215 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 TWNKQ96RR1 684 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 PCDH9Q9HC56 1237 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 SAR1AQ9NR31 198 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 GPATCH2LQ9NWQ4 482 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 XPO7Q9UIA9 1087 aaKnown RBP9.67□□□□□ -0.86
SMG6-202ENST00000354901 ARHGAP10A1A4S6 786 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 ALOX15BO15296 676 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 RAG1P15918 1043 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 MCCD1P59942 119 aaPredicted RBP9.67□□□□□ -0.86
SMG6-202ENST00000354901 PHEXP78562 749 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 PPP6R3Q5H9R7 873 aaPredicted RBP9.67□□□□□ -0.86
SMG6-202ENST00000354901 FAM102AQ5T9C2 384 aaPredicted RBP9.67□□□□□ -0.86
SMG6-202ENST00000354901 GADL1Q6ZQY3 521 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 LPCAT2Q7L5N7 544 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 TMPRSS6Q8IU80 811 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 SPATA18Q8TC71 538 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 MPHOSPH6Q99547 160 aaKnown RBP9.67□□□□□ -0.86
SMG6-202ENST00000354901 ACO2Q99798 780 aaKnown RBP9.67□□□□□ -0.86
SMG6-202ENST00000354901 TRPC7Q9HCX4 862 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 RNF19AQ9NV58 838 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 KANSL3Q9P2N6 904 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 DTNAQ9Y4J8 743 aa9.67□□□□□ -0.86
SMG6-202ENST00000354901 A6NL46 340 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 M0QYV0 167 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 EIF3FO00303 357 aaPredicted RBP9.66□□□□□ -0.86
SMG6-202ENST00000354901 ARIH2O95376 493 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 ERBB2P04626 1255 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 NFICP08651 508 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 ABHD2P08910 425 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 MSX2P35548 267 aaPredicted RBP9.66□□□□□ -0.86
SMG6-202ENST00000354901 RGS7P49802 495 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 SLC5A3P53794 718 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 HDAC4P56524 1084 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 GEMIN4P57678 1058 aaKnown RBP9.66□□□□□ -0.86
SMG6-202ENST00000354901 MSLNQ13421 630 aaPredicted RBP9.66□□□□□ -0.86
SMG6-202ENST00000354901 HADHQ16836 314 aaKnown RBP9.66□□□□□ -0.86
SMG6-202ENST00000354901 CTC1Q2NKJ3 1217 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 ZNF667Q5HYK9 610 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 NOL9Q5SY16 702 aaKnown RBP9.66□□□□□ -0.86
SMG6-202ENST00000354901 DARS2Q6PI48 645 aaKnown RBP9.66□□□□□ -0.86
SMG6-202ENST00000354901 ANKRD36BP1Q96IX9 119 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 PPP1R10Q96QC0 940 aaKnown RBP9.66□□□□□ -0.86
SMG6-202ENST00000354901 FAIMQ9NVQ4 179 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 RRN3Q9NYV6 651 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 VPS51Q9UID3 782 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 ADAMTS6Q9UKP5 1117 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 CNTN6Q9UQ52 1028 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 COQ6Q9Y2Z9 468 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 LOC100653049A0A140TA62 436 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 H7C0C1 242 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 ZMPSTE24O75844 475 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 KRT34O76011 436 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 PIGRP01833 764 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 ITGB3P05106 788 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 TFAP2AP05549 437 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 HOXC6P09630 235 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 KDELR1P24390 212 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 MIPP30301 263 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 ASPAP45381 313 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 ATP5OP48047 213 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 CDH6P55285 790 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 UBAP2LQ14157 1087 aaKnown RBP9.66□□□□□ -0.86
SMG6-202ENST00000354901 C15orf59Q2T9L4 293 aaPredicted RBP9.66□□□□□ -0.86
SMG6-202ENST00000354901 ANKRD20A4Q4UJ75 823 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 METTL21CQ5VZV1 264 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 FAM160B1Q5W0V3 765 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 PDSS2Q86YH6 399 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 IGDCC3Q8IVU1 814 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 PPIL6Q8IXY8 311 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 PDIK1LQ8N165 341 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 SLC35B2Q8TB61 432 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 DENND1AQ8TEH3 1009 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 SEPT1Q8WYJ6 367 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 TMIGD2Q96BF3 282 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 PTCD3Q96EY7 689 aaKnown RBP9.66□□□□□ -0.86
SMG6-202ENST00000354901 CFAP36Q96G28 342 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 HEXIM2Q96MH2 286 aaKnown RBP9.66□□□□□ -0.86
SMG6-202ENST00000354901 WDR83Q9BRX9 315 aaKnown RBP9.66□□□□□ -0.86
SMG6-202ENST00000354901 MINDY3Q9H8M7 445 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 ZNF395Q9H8N7 513 aaPredicted RBP9.66□□□□□ -0.86
SMG6-202ENST00000354901 CYLDQ9NQC7 956 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 DDX56Q9NY93 547 aaKnown RBP9.66□□□□□ -0.86
SMG6-202ENST00000354901 GPRC5DQ9NZD1 345 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 RABGEF1Q9UJ41 708 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 SHOC2Q9UQ13 582 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 INPP5FQ9Y2H2 1132 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 ACTL7BQ9Y614 415 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 IKBKGQ9Y6K9 419 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 TCRBV5S1A1TA0A578 114 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 SOWAHBA6NEL2 793 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 C19orf81C9J6K1 198 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 ATP9BO43861 1147 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 ADAM23O75077 832 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms