RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 ITM2AO43736 263 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 MFSD11O43934 449 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 USP12O75317 370 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 ARL4AP40617 200 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 SULT1E1P49888 294 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 CCNG1P51959 295 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 FASTKD1Q53R41 847 aaKnown RBP20.17■□□□□ 0.82
COL13A1-201ENST00000354547 PPM1JQ5JR12 505 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 SPDYAQ5MJ70 313 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 IFNLR1Q8IU57 520 aaPredicted RBP20.17■□□□□ 0.82
COL13A1-201ENST00000354547 DEFB106AQ8N104 65 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 TTC39CQ8N584 583 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 RBM15BQ8NDT2 890 aaKnown RBP20.17■□□□□ 0.82
COL13A1-201ENST00000354547 MCUQ8NE86 351 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 LRRC42Q9Y546 428 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 DCAF8L1A6NGE4 600 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 BPGMP07738 259 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 RARBP10826 455 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 ACAT1P24752 427 aaKnown RBP20.17■□□□□ 0.82
COL13A1-201ENST00000354547 PDE1BQ01064 536 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 OCRLQ01968 901 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 BST2Q10589 180 aaKnown RBP20.17■□□□□ 0.82
COL13A1-201ENST00000354547 SNX30Q5VWJ9 437 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.17■□□□□ 0.82
COL13A1-201ENST00000354547 SLC25A41Q8N5S1 370 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 ADAM32Q8TC27 787 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 THTPAQ9BU02 230 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 SNX25Q9H3E2 840 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 SLC24A3Q9HC58 644 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 BATF3Q9NR55 127 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 ARHGEF4Q9NR80 690 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 NMRK1Q9NWW6 199 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.17■□□□□ 0.82
COL13A1-201ENST00000354547 KCNK4Q9NYG8 393 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 DONSONQ9NYP3 566 aa20.17■□□□□ 0.82
COL13A1-201ENST00000354547 TPP1O14773 563 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 ABCG1P45844 678 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 KYAT1Q16773 422 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 N4BP2L1Q5TBK1 243 aaPredicted RBP20.16■□□□□ 0.82
COL13A1-201ENST00000354547 C9orf57Q5W0N0 161 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 NRG4Q8WWG1 115 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 PGBD4Q96DM1 585 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.16■□□□□ 0.82
COL13A1-201ENST00000354547 SIRPGQ9P1W8 387 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 WASF2Q9Y6W5 498 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 PRR5-ARHGAP8B1AHC4 643 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 KCNK1O00180 336 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 TBX10O75333 385 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 ERVK-10P10266 1014 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 MLH1P40692 756 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 NDUFV1P49821 464 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 ARHGAP8P85298 464 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 ADIGQ0VDE8 80 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 TEX44Q53QW1 395 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 TRIM42Q8IWZ5 723 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 LRRC39Q96DD0 335 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 SNX27Q96L92 541 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 QKIQ96PU8 341 aaKnown RBP eCLIP20.16■□□□□ 0.82
COL13A1-201ENST00000354547 WWP1Q9H0M0 922 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 RNF39Q9H2S5 420 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 ZNF408Q9H9D4 720 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 STOML1Q9UBI4 398 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 RNF103O00237 685 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 KLF11O14901 512 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 NVLO15381 856 aaKnown RBP20.16■□□□□ 0.82
COL13A1-201ENST00000354547 PSMB4P28070 264 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 TSNAXIP1Q2TAA8 658 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 ANKRD52Q8NB46 1076 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 C7orf26Q96N11 449 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 XAB2Q9HCS7 855 aaKnown RBP20.16■□□□□ 0.82
COL13A1-201ENST00000354547 CACNG4Q9UBN1 327 aa20.16■□□□□ 0.82
COL13A1-201ENST00000354547 HBS1LQ9Y450 684 aaKnown RBP20.16■□□□□ 0.82
COL13A1-201ENST00000354547 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.15■□□□□ 0.82
COL13A1-201ENST00000354547 PSMG1O95456 288 aa20.15■□□□□ 0.82
COL13A1-201ENST00000354547 CRHR1P34998 444 aa20.15■□□□□ 0.82
COL13A1-201ENST00000354547 MAGEA3P43357 314 aa20.15■□□□□ 0.82
COL13A1-201ENST00000354547 SNX16P57768 344 aa20.15■□□□□ 0.82
COL13A1-201ENST00000354547 KRT72Q14CN4 511 aa20.15■□□□□ 0.82
COL13A1-201ENST00000354547 FBXO47Q5MNV8 452 aa20.15■□□□□ 0.82
COL13A1-201ENST00000354547 CAPRIN2Q6IMN6 1127 aaKnown RBP20.15■□□□□ 0.82
COL13A1-201ENST00000354547 ANO7Q6IWH7 933 aa20.15■□□□□ 0.82
COL13A1-201ENST00000354547 SLC27A1Q6PCB7 646 aa20.15■□□□□ 0.82
COL13A1-201ENST00000354547 FASTKD5Q7L8L6 764 aaKnown RBP20.15■□□□□ 0.82
COL13A1-201ENST00000354547 SLC26A9Q7LBE3 791 aa20.15■□□□□ 0.82
COL13A1-201ENST00000354547 RSPH3Q86UC2 560 aa20.15■□□□□ 0.82
COL13A1-201ENST00000354547 POU5F2Q8N7G0 328 aa20.15■□□□□ 0.82
COL13A1-201ENST00000354547 ZNF358Q9NW07 568 aa20.15■□□□□ 0.82
COL13A1-201ENST00000354547 DNAJC16Q9Y2G8 782 aa20.15■□□□□ 0.82
COL13A1-201ENST00000354547 TKTP29401 623 aaKnown RBP20.15■□□□□ 0.82
COL13A1-201ENST00000354547 GJA5P36382 358 aa20.15■□□□□ 0.82
COL13A1-201ENST00000354547 CCNFP41002 786 aa20.15■□□□□ 0.82
COL13A1-201ENST00000354547 PTPN9P43378 593 aa20.15■□□□□ 0.82
COL13A1-201ENST00000354547 BCAT1P54687 386 aa20.15■□□□□ 0.82
COL13A1-201ENST00000354547 SARNPP82979 210 aaKnown RBP20.15■□□□□ 0.82
COL13A1-201ENST00000354547 PPIL2Q13356 520 aa20.15■□□□□ 0.82
COL13A1-201ENST00000354547 KBTBD7Q8WVZ9 684 aa20.15■□□□□ 0.82
COL13A1-201ENST00000354547 USP6NLQ92738 828 aa20.15■□□□□ 0.82
COL13A1-201ENST00000354547 MTBPQ96DY7 904 aa20.15■□□□□ 0.82
COL13A1-201ENST00000354547 P2RY11Q96G91 374 aa20.15■□□□□ 0.82
COL13A1-201ENST00000354547 XPNPEP3Q9NQH7 507 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms