RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 STK39Q9UEW8 545 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 COQ4Q9Y3A0 265 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 TEX264Q9Y6I9 313 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 SCN7AQ01118 1682 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 K7EPI3 171 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 SNNO75324 88 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-201ENST00000352993 SERPINB7O75635 380 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 ZBED1O96006 694 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 APOEP02649 317 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 SERPINE1P05121 402 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 KRT7P08729 469 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 CRHR1P34998 444 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 GMPRP36959 345 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 PHKA2P46019 1235 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 KPNA1P52294 538 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-201ENST00000352993 NDST2P52849 883 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 GTF2BQ00403 316 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 NFIAQ12857 509 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 PRKG1Q13976 671 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 CCDC142Q17RM4 750 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 SLC10A5Q5PT55 438 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 ZFP1Q6P2D0 407 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 TTC33Q6PID6 262 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-201ENST00000352993 SCARA5Q6ZMJ2 495 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 SH2D5Q6ZV89 423 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 SLC15A3Q8IY34 581 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 CENPSQ8N2Z9 138 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 TMEM35BQ8NCS4 154 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 BORCS5Q969J3 196 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 C12orf43Q96C57 262 aaKnown RBP7.85□□□□□ -1.15
BRCA1-201ENST00000352993 RCN3Q96D15 328 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 MARK4Q96L34 752 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 ZNF778Q96MU6 729 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 SLC4A5Q9BY07 1137 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 C17orf75Q9HAS0 396 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 SMYD2Q9NRG4 433 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 PIH1D1Q9NWS0 290 aaKnown RBP7.85□□□□□ -1.15
BRCA1-201ENST00000352993 SLC17A6Q9P2U8 582 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 EFR3BQ9Y2G0 817 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 TTLL3Q9Y4R7 772 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 C1orf232A0A0U1RR37 186 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 KANSL1LA0AUZ9 987 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 BIRC5O15392 142 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 FBXO21O94952 628 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 KRT3P12035 628 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 PTPN1P18031 435 aaKnown RBP7.85□□□□□ -1.15
BRCA1-201ENST00000352993 ME2P23368 584 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 KDELR1P24390 212 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 EPHA3P29320 983 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 TYK2P29597 1187 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 QARSP47897 775 aaKnown RBP7.85□□□□□ -1.15
BRCA1-201ENST00000352993 NPTX2P47972 431 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 BCAP31P51572 246 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 YWHAZP63104 245 aaKnown RBP7.85□□□□□ -1.15
BRCA1-201ENST00000352993 MMRN1Q13201 1228 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 GRAPQ13588 217 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 APOFQ13790 326 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 TGFBIQ15582 683 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 CDO1Q16878 200 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 TRIM16LQ309B1 348 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 SCYL2Q6P3W7 929 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 PHF13Q86YI8 300 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-201ENST00000352993 C12orf56Q8IXR9 622 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 DSELQ8IZU8 1212 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 LILRA2Q8N149 483 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 FAM47BQ8NA70 645 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 DEPTORQ8TB45 409 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 GRAPLQ8TC17 118 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-201ENST00000352993 TMC2Q8TDI7 906 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 ATP6V1E2Q96A05 226 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 PLEKHA8Q96JA3 519 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 VCPIP1Q96JH7 1222 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 HEPHQ9BQS7 1158 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 STRA6Q9BX79 667 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 KLC2Q9H0B6 622 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 FAM96AQ9H5X1 160 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 WDR55Q9H6Y2 383 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-201ENST00000352993 COG4Q9H9E3 785 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 PRR12Q9ULL5 1215 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 CDC14AQ9UNH5 594 aa7.85□□□□□ -1.15
BRCA1-201ENST00000352993 DICER1Q9UPY3 1922 aaKnown RBP7.85□□□□□ -1.15
BRCA1-201ENST00000352993 DDX60LQ5H9U9 1706 aaKnown RBP7.85□□□□□ -1.15
BRCA1-201ENST00000352993 TMX2-CTNND1H3BSU7 103 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 GNPATO15228 680 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 ZBTB14O43829 449 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 AMHP03971 560 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 UGT1A6P19224 532 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 UGT1A1P22309 533 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 UGT1A4P22310 534 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 RFC1P35251 1148 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-201ENST00000352993 UGT1A3P35503 534 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 UGT1A5P35504 534 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 PCYT1AP49585 367 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 CDH6P55285 790 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 ZNF252P-AS1Q0IIN9 211 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 NR1D2Q14995 579 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 TAF5Q15542 800 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 DCAF6Q58WW2 860 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 GPAT2Q6NUI2 795 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 BORAQ6PGQ7 559 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms