RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 GREB1Q4ZG55 1949 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 PLXNA3P51805 1871 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 CDH23Q9H251 3354 aa11.38□□□□□ -0.59
ECM1-201ENST00000346569 APOL1O14791 398 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 TP73O15350 636 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 ATP8B1O43520 1251 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 TGM5O43548 720 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 TBX18O95935 607 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 RB1P06400 928 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 DNAJB1P25685 340 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 DNAJB2P25686 324 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 CCR1P32246 355 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 ELF1P32519 619 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 ARL4AP40617 200 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 RPL21P46778 160 aaKnown RBP11.37□□□□□ -0.59
ECM1-201ENST00000346569 ALDH1A3P47895 512 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 NR2C2P49116 596 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 MLLT6P55198 1093 aaPredicted RBP11.37□□□□□ -0.59
ECM1-201ENST00000346569 DPYSQ14117 519 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 MAP9Q49MG5 647 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 CHRDL2Q6WN34 429 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 MRPL43Q8N983 215 aaKnown RBP11.37□□□□□ -0.59
ECM1-201ENST00000346569 P3H4Q92791 437 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 HAUS1Q96CS2 278 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 TRMT2BQ96GJ1 504 aaKnown RBP11.37□□□□□ -0.59
ECM1-201ENST00000346569 SERPINB11Q96P15 392 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 FUT8Q9BYC5 575 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 NEUROG2Q9H2A3 272 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 DPH5Q9H2P9 285 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 USP29Q9HBJ7 922 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 ALG13Q9NP73 1137 aaKnown RBP11.37□□□□□ -0.59
ECM1-201ENST00000346569 ARHGEF4Q9NR80 690 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 ZDHHC18Q9NUE0 388 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 OR12D3Q9UGF7 316 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 ZNF148Q9UQR1 794 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 TLR6Q9Y2C9 796 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 SNX24Q9Y343 169 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 YIPF1Q9Y548 306 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 KIAA1671Q9BY89 1806 aa11.37□□□□□ -0.59
ECM1-201ENST00000346569 ZNF638Q14966 1978 aaKnown RBP11.37□□□□□ -0.59
ECM1-201ENST00000346569 BCLAF3A2AJT9 711 aaKnown RBP11.36□□□□□ -0.59
ECM1-201ENST00000346569 ZNF840PA6NDX5 716 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 H3BRJ5 948 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 MAP2K7O14733 419 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 DCLK1O15075 740 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 GAS8O95995 478 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 C1RP00736 705 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 FAM153BP0C7A2 387 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 RBP3P10745 1247 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 STIP1P31948 543 aaKnown RBP11.36□□□□□ -0.59
ECM1-201ENST00000346569 MAGEA10P43363 369 aaPredicted RBP11.36□□□□□ -0.59
ECM1-201ENST00000346569 EIF3EP60228 445 aaKnown RBP11.36□□□□□ -0.59
ECM1-201ENST00000346569 NRG1Q02297 640 aaPredicted RBP11.36□□□□□ -0.59
ECM1-201ENST00000346569 UBE3AQ05086 875 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 CAMK1Q14012 370 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 PAFAH1B3Q15102 231 aaKnown RBP11.36□□□□□ -0.59
ECM1-201ENST00000346569 SHHQ15465 462 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 TRIP4Q15650 581 aaPredicted RBP11.36□□□□□ -0.59
ECM1-201ENST00000346569 FAM153CQ494X1 144 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 MANEALQ5VSG8 457 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 NCBP2-AS2Q69YL0 99 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 FAM109BQ6ICB4 259 aaPredicted RBP11.36□□□□□ -0.59
ECM1-201ENST00000346569 EMBQ6PCB8 327 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 C1orf228Q6PIY5 440 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 ZDHHC24Q6UX98 284 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 RFX8Q6ZV50 586 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 SPRED2Q7Z698 418 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 DNAJB7Q7Z6W7 309 aaPredicted RBP11.36□□□□□ -0.59
ECM1-201ENST00000346569 UNC45BQ8IWX7 931 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 GSPT2Q8IYD1 628 aaKnown RBP11.36□□□□□ -0.59
ECM1-201ENST00000346569 GLIS1Q8NBF1 620 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 PDZD8Q8NEN9 1154 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.36□□□□□ -0.59
ECM1-201ENST00000346569 POF1BQ8WVV4 589 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 CAVIN3Q969G5 261 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 FCRL2Q96LA5 508 aaPredicted RBP11.36□□□□□ -0.59
ECM1-201ENST00000346569 C1orf74Q96LT6 269 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 C17orf80Q9BSJ5 609 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 TMEM121Q9BTD3 319 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 TRIM31Q9BZY9 425 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 FAM153AQ9UHL3 310 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 MAGED2Q9UNF1 606 aaPredicted RBP11.36□□□□□ -0.59
ECM1-201ENST00000346569 EYSQ5T1H1 3165 aa11.36□□□□□ -0.59
ECM1-201ENST00000346569 C2orf71A6NGG8 1288 aa11.35□□□□□ -0.59
ECM1-201ENST00000346569 GRXCR1A8MXD5 290 aa11.35□□□□□ -0.59
ECM1-201ENST00000346569 EEF2KO00418 725 aaKnown RBP11.35□□□□□ -0.59
ECM1-201ENST00000346569 MSI1O43347 362 aaKnown RBP11.35□□□□□ -0.59
ECM1-201ENST00000346569 CREB3O43889 395 aa11.35□□□□□ -0.59
ECM1-201ENST00000346569 PAGE1O75459 146 aa11.35□□□□□ -0.59
ECM1-201ENST00000346569 LRIG2O94898 1065 aa11.35□□□□□ -0.59
ECM1-201ENST00000346569 IGLV3-27P01718 113 aa11.35□□□□□ -0.59
ECM1-201ENST00000346569 KRT14P02533 472 aa11.35□□□□□ -0.59
ECM1-201ENST00000346569 F11P03951 625 aa11.35□□□□□ -0.59
ECM1-201ENST00000346569 SLC2A3P11169 496 aa11.35□□□□□ -0.59
ECM1-201ENST00000346569 MYOGP15173 224 aa11.35□□□□□ -0.59
ECM1-201ENST00000346569 ERCC2P18074 760 aa11.35□□□□□ -0.59
ECM1-201ENST00000346569 ITIH2P19823 946 aa11.35□□□□□ -0.59
ECM1-201ENST00000346569 CTNNB1P35222 781 aa11.35□□□□□ -0.59
ECM1-201ENST00000346569 PPP3CCP48454 512 aa11.35□□□□□ -0.59
ECM1-201ENST00000346569 TBX4P57082 545 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms