RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 PHTF2Q8N3S3 785 aa16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 IL17RCQ8NAC3 791 aa16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 C18orf8Q96DM3 657 aa16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 ERGIC2Q96RQ1 377 aa16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 GANQ9H2C0 597 aa16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.4■□□□□ 0.225e-7■■■■□ 20.5
TSPAN4-201ENST00000346501 TJP2Q9UDY2 1190 aa16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 EBF1Q9UH73 591 aa16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 STOML2Q9UJZ1 356 aa16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 STAP1Q9ULZ2 295 aa16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 SLC27A6Q9Y2P4 619 aa16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 STARD13Q9Y3M8 1113 aa16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 PAXBP1Q9Y5B6 917 aa16.4■□□□□ 0.22
TSPAN4-201ENST00000346501 SYCE3A1L190 88 aa16.39■□□□□ 0.21
TSPAN4-201ENST00000346501 GOLGA6L19H0YKK7 550 aa16.39■□□□□ 0.21
TSPAN4-201ENST00000346501 TIMM44O43615 452 aa16.39■□□□□ 0.21
TSPAN4-201ENST00000346501 TSPAN3O60637 253 aa16.39■□□□□ 0.21
TSPAN4-201ENST00000346501 TRUB2O95900 331 aaKnown RBP16.39■□□□□ 0.21
TSPAN4-201ENST00000346501 MOCS2O96007 188 aaPredicted RBP16.39■□□□□ 0.21
TSPAN4-201ENST00000346501 SERPINC1P01008 464 aa16.39■□□□□ 0.21
TSPAN4-201ENST00000346501 IGLV3-27P01718 113 aa16.39■□□□□ 0.21
TSPAN4-201ENST00000346501 PXNP49023 591 aaPredicted RBP16.39■□□□□ 0.21
TSPAN4-201ENST00000346501 MPP7Q5T2T1 576 aa16.39■□□□□ 0.21
TSPAN4-201ENST00000346501 DPY19L2P1Q6NXN4 242 aa16.39■□□□□ 0.21
TSPAN4-201ENST00000346501 TRIM72Q6ZMU5 477 aa16.39■□□□□ 0.21
TSPAN4-201ENST00000346501 SLC26A9Q7LBE3 791 aa16.39■□□□□ 0.21
TSPAN4-201ENST00000346501 TAC4Q86UU9 113 aa16.39■□□□□ 0.21
TSPAN4-201ENST00000346501 WDTC1Q8N5D0 677 aa16.39■□□□□ 0.21
TSPAN4-201ENST00000346501 SUMF1Q8NBK3 374 aa16.39■□□□□ 0.21
TSPAN4-201ENST00000346501 EPS8L1Q8TE68 723 aa16.39■□□□□ 0.21
TSPAN4-201ENST00000346501 GAB3Q8WWW8 586 aa16.39■□□□□ 0.21
TSPAN4-201ENST00000346501 BTN2A3PQ96KV6 586 aa16.39■□□□□ 0.21
TSPAN4-201ENST00000346501 C2orf42Q9NWW7 574 aa16.39■□□□□ 0.21
TSPAN4-201ENST00000346501 DDIT4Q9NX09 232 aa16.39■□□□□ 0.21
TSPAN4-201ENST00000346501 SIK3Q9Y2K2 1263 aa16.39■□□□□ 0.21
TSPAN4-201ENST00000346501 FANCMQ8IYD8 2048 aa16.39■□□□□ 0.21
TSPAN4-201ENST00000346501 ZFHX2Q9C0A1 2572 aaPredicted RBP16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 PTPRZ1P23471 2315 aaPredicted RBP16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 GFRA2O00451 464 aa16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 FYNP06241 537 aa16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 HOXB2P14652 356 aa16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 CCR1P32246 355 aa16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 CDH5P33151 784 aaPredicted RBP16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 NOS2P35228 1153 aa16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 KLK7P49862 253 aa16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 DMWDQ09019 674 aa16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 STARD3Q14849 445 aa16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 ELF2Q15723 593 aa16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 PTPN20Q4JDL3 420 aa16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 EMC10Q5UCC4 262 aa16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 SYPL2Q5VXT5 272 aa16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 ANO7Q6IWH7 933 aa16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 FAM183BPQ6ZVS7 135 aa16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 NOP9Q86U38 636 aaKnown RBP16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 DEFB106AQ8N104 65 aa16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 HJURPQ8NCD3 748 aaPredicted RBP16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 ADAM32Q8TC27 787 aa16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 WFIKKN2Q8TEU8 576 aa16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 SPACA7Q96KW9 195 aa16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 CIPCQ9C0C6 399 aa16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 FBXO10Q9UK96 956 aa16.38■□□□□ 0.21
TSPAN4-201ENST00000346501 SYNJ2BP-COX16A0A087WUM0 186 aa16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 SGK1O00141 431 aa16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 HRO43593 1189 aa16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 TBL1XO60907 577 aa16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 DAB1O75553 588 aa16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 GRAP2O75791 330 aa16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 RHOBTB1O94844 696 aa16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 F9P00740 461 aa16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 ERBB2P04626 1255 aa16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 MMEP08473 750 aa16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 CISD3P0C7P0 127 aa16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 ATP1A3P13637 1013 aa16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 SCNN1AP37088 669 aa16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 RNASE9P60153 205 aaKnown RBP16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 CDR2Q01850 454 aa16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 MESP2Q0VG99 397 aa16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 LPAL2Q16609 132 aa16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 FAM102AQ5T9C2 384 aaPredicted RBP16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 OLFML1Q6UWY5 402 aa16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 CHSY1Q86X52 802 aa16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 DHX40Q8IX18 779 aaKnown RBP16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 ZNF397Q8NF99 534 aaPredicted RBP16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 FCRL2Q96LA5 508 aaPredicted RBP16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 SLC2A13Q96QE2 648 aa16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 SEPT11Q9NVA2 429 aaKnown RBP16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.37■□□□□ 0.213e-6■■■□□ 18.3
TSPAN4-201ENST00000346501 COX16Q9P0S2 106 aa16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 PLA2G4CQ9UP65 541 aa16.37■□□□□ 0.21
TSPAN4-201ENST00000346501 TCRBV21S2A2A0A5A6 115 aa16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 F5H5T6 163 aa16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 TRIM24O15164 1050 aa16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 SYNCRIPO60506 623 aaKnown RBP16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 MOCS3O95396 460 aa16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 ATP5BP06576 529 aaKnown RBP16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 RETP07949 1114 aa16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 HNRNPLP14866 589 aaKnown RBP eCLIP16.36■□□□□ 0.215e-7■□□□□ 11.2
TSPAN4-201ENST00000346501 FERP16591 822 aa16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 HOXD9P28356 352 aaPredicted RBP16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 MATKP42679 507 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms