RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 TBX4P57082 545 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 ILF2Q12905 390 aaKnown RBP11.19□□□□□ -0.62
CLCN6-202ENST00000346436 PSMD5Q16401 504 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 PCSK7Q16549 785 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 PTPRN2Q92932 1015 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 DNAJC1Q96KC8 554 aaKnown RBP11.19□□□□□ -0.62
CLCN6-202ENST00000346436 THTPAQ9BU02 230 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 LRRC4BQ9NT99 713 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 FAM53CQ9NYF3 392 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 APPL1Q9UKG1 709 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 TCRBV7S2A1N4TA0A589 114 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 KPNA3O00505 521 aaPredicted RBP11.19□□□□□ -0.62
CLCN6-202ENST00000346436 PSMD10O75832 226 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 LMNAP02545 664 aaKnown RBP11.19□□□□□ -0.62
CLCN6-202ENST00000346436 SMIM10L2AP0DMW4 78 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 SMIM10L2BP0DMW5 78 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 KLHL35Q6PF15 583 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 MTSS1LQ765P7 747 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 RBM23Q86U06 439 aaKnown RBP11.19□□□□□ -0.62
CLCN6-202ENST00000346436 MTDHQ86UE4 582 aaKnown RBP11.19□□□□□ -0.62
CLCN6-202ENST00000346436 WDR49Q8IV35 697 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 TMCO5AQ8N6Q1 288 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 IL31RAQ8NI17 732 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 MAGEB18Q96M61 343 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 SNTG2Q9NY99 539 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 HEY2Q9UBP5 337 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 BANF1O75531 89 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 FSBPO95073 299 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 CHRM3P20309 590 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 TYK2P29597 1187 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 CCR1P32246 355 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 MYL6P60660 151 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 AMHR2Q16671 573 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 MRNIPQ6NTE8 343 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 PRR23CQ6ZRP0 262 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 NLRP9Q7RTR0 991 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 RSPH1Q8WYR4 309 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 TSPAN18Q96SJ8 248 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 ANLNQ9NQW6 1124 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 MYH2Q9UKX2 1941 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 B2RBV5 119 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 DUSP11O75319 330 aaKnown RBP11.18□□□□□ -0.62
CLCN6-202ENST00000346436 ABCE1P61221 599 aaKnown RBP11.18□□□□□ -0.62
CLCN6-202ENST00000346436 AGGF1Q8N302 714 aaeCLIP11.18□□□□□ -0.62
CLCN6-202ENST00000346436 MREGQ8N565 214 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 ZSWIM2Q8NEG5 633 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 PIK3R5Q8WYR1 880 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 APOL5Q9BWW9 433 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 MAF1Q9H063 256 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 POLMQ9NP87 494 aaPredicted RBP11.18□□□□□ -0.62
CLCN6-202ENST00000346436 A1CFQ9NQ94 594 aaKnown RBP11.18□□□□□ -0.62
CLCN6-202ENST00000346436 GMEB2Q9UKD1 530 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 DNPEPQ9ULA0 475 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 SNCAIPQ9Y6H5 919 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 TRIM49D1C9J1S8 452 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 GOLGA8TH3BQL2 631 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 SEPT4O43236 478 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 NFATC1O95644 943 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 CRTAMO95727 393 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 BST2Q10589 180 aaKnown RBP11.18□□□□□ -0.62
CLCN6-202ENST00000346436 CELF3Q5SZQ8 465 aaKnown RBP11.18□□□□□ -0.62
CLCN6-202ENST00000346436 C3orf20Q8ND61 904 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 ZDHHC4Q9NPG8 344 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 C5P01031 1676 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 CBX4O00257 560 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 PSTPIP1O43586 416 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 MSH3P20585 1137 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 SSTR1P30872 391 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 CUL3Q13618 768 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 MORF4L2Q15014 288 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 PPIL6Q8IXY8 311 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 NDE1Q9NXR1 346 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 CD274Q9NZQ7 290 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 CCDC189A1A4V9 331 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 BTBD19C9JJ37 291 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 LCA5LO95447 670 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 AUHQ13825 339 aaKnown RBP11.18□□□□□ -0.62
CLCN6-202ENST00000346436 COBLL1Q53SF7 1204 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 ARID3BQ8IVW6 561 aaPredicted RBP11.18□□□□□ -0.62
CLCN6-202ENST00000346436 EXD1Q8NHP7 514 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 TFB1MQ8WVM0 346 aaKnown RBP11.18□□□□□ -0.62
CLCN6-202ENST00000346436 CAMKK2Q96RR4 588 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 PDGFDQ9GZP0 370 aaPredicted RBP11.18□□□□□ -0.62
CLCN6-202ENST00000346436 RPRD1BQ9NQG5 326 aaKnown RBP11.18□□□□□ -0.62
CLCN6-202ENST00000346436 TBC1D14Q9P2M4 693 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 KLHL3Q9UH77 587 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 COG5Q9UP83 839 aa11.18□□□□□ -0.62
CLCN6-202ENST00000346436 SMAPO00193 183 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 PFKMP08237 780 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 USP17L7P0C7H9 530 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 UBTFL6P0CB48 400 aaPredicted RBP11.17□□□□□ -0.62
CLCN6-202ENST00000346436 PECAM1P16284 738 aaPredicted RBP11.17□□□□□ -0.62
CLCN6-202ENST00000346436 HDAC4P56524 1084 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 CHI3L2Q15782 390 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 TIGD5Q53EQ6 642 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 HECTD3Q5T447 861 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 TMEM154Q6P9G4 183 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 MFSD7Q6UXD7 560 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 BTNL9Q6UXG8 535 aa11.17□□□□□ -0.62
CLCN6-202ENST00000346436 SPOCD1Q6ZMY3 1216 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms