RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 RNF225M0QZC1 329 aaPredicted RBP12.97□□□□□ -0.33
SGCA-202ENST00000344627 O00370 1275 aa12.97□□□□□ -0.33
SGCA-202ENST00000344627 P4HA2O15460 535 aa12.97□□□□□ -0.33
SGCA-202ENST00000344627 TSPAN3O60637 253 aa12.97□□□□□ -0.33
SGCA-202ENST00000344627 PENKP01210 267 aaPredicted RBP12.97□□□□□ -0.33
SGCA-202ENST00000344627 AFPP02771 609 aaKnown RBP12.97□□□□□ -0.33
SGCA-202ENST00000344627 PAEPP09466 180 aa12.97□□□□□ -0.33
SGCA-202ENST00000344627 ITPKAP23677 461 aa12.97□□□□□ -0.33
SGCA-202ENST00000344627 PM20D1Q6GTS8 502 aa12.97□□□□□ -0.33
SGCA-202ENST00000344627 IL27RAQ6UWB1 636 aa12.97□□□□□ -0.33
SGCA-202ENST00000344627 LCLAT1Q6UWP7 414 aa12.97□□□□□ -0.33
SGCA-202ENST00000344627 ARHGEF19Q8IW93 802 aa12.97□□□□□ -0.33
SGCA-202ENST00000344627 CPXM2Q8N436 756 aa12.97□□□□□ -0.33
SGCA-202ENST00000344627 DEFB119Q8N690 84 aa12.97□□□□□ -0.33
SGCA-202ENST00000344627 FRMD1Q8N878 549 aa12.97□□□□□ -0.33
SGCA-202ENST00000344627 ZNF557Q8N988 423 aaPredicted RBP12.97□□□□□ -0.33
SGCA-202ENST00000344627 RBBP8NLQ8NC74 664 aaPredicted RBP12.97□□□□□ -0.33
SGCA-202ENST00000344627 EHBP1Q8NDI1 1231 aa12.97□□□□□ -0.33
SGCA-202ENST00000344627 DEFB124Q8NES8 71 aa12.97□□□□□ -0.33
SGCA-202ENST00000344627 TFAP2BQ92481 460 aa12.97□□□□□ -0.33
SGCA-202ENST00000344627 GOLGA1Q92805 767 aa12.97□□□□□ -0.33
SGCA-202ENST00000344627 KAT5Q92993 513 aa12.97□□□□□ -0.33
SGCA-202ENST00000344627 ACOX2Q99424 681 aa12.97□□□□□ -0.33
SGCA-202ENST00000344627 FBRSQ9HAH7 460 aa12.97□□□□□ -0.33
SGCA-202ENST00000344627 CD248Q9HCU0 757 aa12.97□□□□□ -0.33
SGCA-202ENST00000344627 CACNA2D2Q9NY47 1150 aa12.97□□□□□ -0.33
SGCA-202ENST00000344627 SFMBT1Q9UHJ3 866 aa12.97□□□□□ -0.33
SGCA-202ENST00000344627 RAD54BQ9Y620 910 aa12.97□□□□□ -0.33
SGCA-202ENST00000344627 YJEFN3A6XGL0 299 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 E7ENQ6 273 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 GIPC1O14908 333 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 PMM2O15305 246 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 CISD3P0C7P0 127 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 NDUFV2P19404 249 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 CD6P30203 668 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 MAPK8P45983 427 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 UBE2HP62256 183 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 ARID5AQ03989 594 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 ENPP2Q13822 863 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 STILQ15468 1287 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 CNGA2Q16280 664 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 TPD52L1Q16890 204 aaPredicted RBP12.96□□□□□ -0.33
SGCA-202ENST00000344627 KIAA1324Q6UXG2 1013 aaKnown RBP12.96□□□□□ -0.33
SGCA-202ENST00000344627 UBR7Q8N806 425 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 TRIML1Q8N9V2 468 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 DNASE2BQ8WZ79 361 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 GATA6Q92908 595 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 PLD4Q96BZ4 506 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 MRGPRX1Q96LB2 322 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 SCNM1Q9BWG6 230 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 MIS12Q9H081 205 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 INTS2Q9H0H0 1204 aaKnown RBP12.96□□□□□ -0.33
SGCA-202ENST00000344627 UBE2TQ9NPD8 197 aaPredicted RBP12.96□□□□□ -0.33
SGCA-202ENST00000344627 ITM2CQ9NQX7 267 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 ABCC13Q9NSE7 274 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 KIAA1468Q9P260 1216 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 HCN2Q9UL51 889 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 ZMIZ1Q9ULJ6 1067 aa12.96□□□□□ -0.33
SGCA-202ENST00000344627 A0A1B0GTW7 788 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 WASH3PC4AMC7 463 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 SYNCRIPO60506 623 aaKnown RBP12.95□□□□□ -0.34
SGCA-202ENST00000344627 LATS1O95835 1130 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 IGLV3-19P01714 112 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 ZNF883P0CG24 379 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 C7P10643 843 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 DAOAP59103 153 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 SIM1P81133 766 aaPredicted RBP12.95□□□□□ -0.34
SGCA-202ENST00000344627 FYB2Q5VWT5 728 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 KIAA1211LQ6NV74 962 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 PMF1Q6P1K2 205 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 BHLHA9Q7RTU4 235 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 ANKS1BQ7Z6G8 1248 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 TRIM59Q8IWR1 403 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 RGL4Q8IZJ4 473 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 MINDY1Q8N5J2 469 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 KCTD13Q8WZ19 329 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 HSPA12BQ96MM6 686 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 CRACR2AQ9BSW2 395 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 GTPBP2Q9BX10 602 aaKnown RBP12.95□□□□□ -0.34
SGCA-202ENST00000344627 TMEM121BQ9BXQ6 578 aaPredicted RBP12.95□□□□□ -0.34
SGCA-202ENST00000344627 CIPCQ9C0C6 399 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 PRDM16Q9HAZ2 1276 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 CNGB3Q9NQW8 809 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 ST7Q9NRC1 585 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 USP36Q9P275 1121 aaKnown RBP12.95□□□□□ -0.34
SGCA-202ENST00000344627 THAP10Q9P2Z0 257 aaPredicted RBP12.95□□□□□ -0.34
SGCA-202ENST00000344627 CYP8B1Q9UNU6 501 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.95□□□□□ -0.34
SGCA-202ENST00000344627 HBS1LQ9Y450 684 aaKnown RBP12.95□□□□□ -0.34
SGCA-202ENST00000344627 PCDHB9Q9Y5E1 797 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 STON1Q9Y6Q2 735 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 PLXND1Q9Y4D7 1925 aa12.95□□□□□ -0.34
SGCA-202ENST00000344627 C1QTNF9BB2RNN3 333 aa12.94□□□□□ -0.34
SGCA-202ENST00000344627 MSI1O43347 362 aaKnown RBP12.94□□□□□ -0.34
SGCA-202ENST00000344627 C1QTNF9P0C862 333 aa12.94□□□□□ -0.34
SGCA-202ENST00000344627 USP8P40818 1118 aa12.94□□□□□ -0.34
SGCA-202ENST00000344627 MFAP3P55082 362 aa12.94□□□□□ -0.34
SGCA-202ENST00000344627 TRIP4Q15650 581 aaPredicted RBP12.94□□□□□ -0.34
SGCA-202ENST00000344627 GEN1Q17RS7 908 aa12.94□□□□□ -0.34
SGCA-202ENST00000344627 PLEKHG6Q3KR16 790 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms