RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 LAMB1P07942 1786 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 ITGADQ13349 1161 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 DPYSQ14117 519 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 ANO7Q6IWH7 933 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 DRICH1Q6PGQ1 229 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-203ENST00000343508 POU5F2Q8N7G0 328 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 COLGALT1Q8NBJ5 622 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 SHC3Q92529 594 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 DCUN1D1Q96GG9 259 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 SPATA33Q96N06 139 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 VPS45Q9NRW7 570 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 A0A087X1B8 175 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 TBKBP1A7MCY6 615 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 CYP2F1P24903 491 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 MARCKSL1P49006 195 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 FASTKQ14296 549 aaKnown RBP4.91□□□□□ -1.62
CSMD3-203ENST00000343508 SNX19Q92543 992 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 ALG3Q92685 438 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 MKL1Q969V6 931 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 C17orf80Q9BSJ5 609 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 CADM1Q9BY67 442 aaKnown RBP4.91□□□□□ -1.62
CSMD3-203ENST00000343508 AGO4Q9HCK5 861 aaKnown RBP4.91□□□□□ -1.62
CSMD3-203ENST00000343508 PTGIRP43119 386 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 RAB27AP51159 221 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 RAD23AP54725 363 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 NFIXQ14938 502 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 ATP6AP1LQ52LC2 224 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 ARMCX4Q5H9R4 360 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 DRAXINQ8NBI3 349 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-203ENST00000343508 C10orf82Q8WW14 230 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 FAM163AQ96GL9 167 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-203ENST00000343508 CYP3A43Q9HB55 503 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 COG5Q9UP83 839 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 VPS9D1Q9Y2B5 631 aa4.91□□□□□ -1.62
CSMD3-203ENST00000343508 BCL9LQ86UU0 1499 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 hCG_1818297A0A087WSY0 165 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 TGFB1I1O43294 461 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 TRMUO75648 421 aaKnown RBP4.9□□□□□ -1.62
CSMD3-203ENST00000343508 MED26O95402 600 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 NFYCQ13952 458 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 DSTYKQ6XUX3 929 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 ZNF570Q96NI8 536 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 RBBP8Q99708 897 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 WDCPQ9H6R7 721 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 IL1RL2Q9HB29 575 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 POLRMTO00411 1230 aaKnown RBP4.9□□□□□ -1.62
CSMD3-203ENST00000343508 GRAP2O75791 330 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 ASMTLO95671 621 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 S100A1P23297 94 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.9□□□□□ -1.62
CSMD3-203ENST00000343508 TNK2Q07912 1038 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 TRIM60Q495X7 471 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 IER5Q5VY09 327 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 C12orf56Q8IXR9 622 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 ZNF513Q8N8E2 541 aaPredicted RBP4.9□□□□□ -1.62
CSMD3-203ENST00000343508 HTR3CQ8WXA8 447 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 RORBQ92753 470 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 SP110Q9HB58 689 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 SAE1Q9UBE0 346 aaPredicted RBP4.9□□□□□ -1.62
CSMD3-203ENST00000343508 TPRKBQ9Y3C4 175 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 RAP2CQ9Y3L5 183 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 A0A1W2PPM1 405 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 SPATA31C1P0DKV0 1188 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 ADORA2BP29275 332 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 GOLGA7BQ2TAP0 167 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 GALNTL6Q49A17 601 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 CMPK2Q5EBM0 449 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 TRIM74Q86UV6 250 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 TRIM73Q86UV7 250 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 KCNMB4Q86W47 210 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 DHRSXQ8N5I4 330 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 TMEM143Q96AN5 459 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 DCUN1D5Q9BTE7 237 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 SLC25A23Q9BV35 468 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 IL22Q9GZX6 179 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 PRMT7Q9NVM4 692 aaPredicted RBP4.9□□□□□ -1.62
CSMD3-203ENST00000343508 SERPINI2O75830 405 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 DDX5P17844 614 aaKnown RBP4.9□□□□□ -1.62
CSMD3-203ENST00000343508 AVPR1AP37288 418 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 PNPLA4P41247 253 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 TRAF2Q12933 501 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 INSCQ1MX18 579 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 SATL1Q86VE3 508 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 PHF13Q86YI8 300 aaPredicted RBP4.9□□□□□ -1.62
CSMD3-203ENST00000343508 MICU2Q8IYU8 434 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 URGCPQ8TCY9 931 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 SEPT1Q8WYJ6 367 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 CEP44Q9C0F1 390 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 GNEQ9Y223 722 aaKnown RBP4.9□□□□□ -1.62
CSMD3-203ENST00000343508 NWD2Q9ULI1 1742 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 TRAFD1O14545 582 aaPredicted RBP4.9□□□□□ -1.62
CSMD3-203ENST00000343508 ZSCAN5DPP0CG00 497 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 ARP10275 920 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 NPY2RP49146 381 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 BCAT1P54687 386 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 BMPR2Q13873 1038 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 LPIN1Q14693 890 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 SV2CQ496J9 727 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 FAM98BQ52LJ0 330 aaKnown RBP4.9□□□□□ -1.62
CSMD3-203ENST00000343508 DCAF12L1Q5VU92 463 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms