RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 PCDHA8Q9Y5H6 950 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 DCKP27707 260 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 TSPYL6Q8N831 410 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 ZNF615Q8N8J6 731 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 PSME2Q9UL46 239 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 SNX12Q9UMY4 172 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 PLD1Q13393 1074 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 DEPDC4Q8N2C3 294 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 SH2B2O14492 632 aaPredicted RBP18.04■□□□□ 0.48
SMAD4-201ENST00000342988 PDGFRAP16234 1089 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 NR6A1Q15406 480 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 BSNDQ8WZ55 320 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 TEKT5Q96M29 485 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 PDGFRBP09619 1106 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 SNRPFP62306 86 aaKnown RBP18.04■□□□□ 0.48
SMAD4-201ENST00000342988 ARPINQ7Z6K5 226 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 C12orf66Q96MD2 445 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 ZMYM1Q5SVZ6 1142 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 PRR5LQ6MZQ0 368 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 RAET1EQ8TD07 263 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 TEX13BQ9BXU2 312 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 TBC1D30Q9Y2I9 924 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 PSMD11O00231 422 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 ZNF806P0C7X5 589 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 IL12AP29459 219 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 PRCPP42785 496 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 CACNB3P54284 484 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 STRIP1Q5VSL9 837 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 OAFQ86UD1 273 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 ARID3BQ8IVW6 561 aaPredicted RBP18.03■□□□□ 0.48
SMAD4-201ENST00000342988 DENND6BQ8NEG7 585 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 SDR42E2A6NKP2 422 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 RECQL5O94762 991 aaPredicted RBP18.03■□□□□ 0.48
SMAD4-201ENST00000342988 DHFRP00374 187 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 ZBTB6Q15916 424 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 SLC15A2Q16348 729 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 C10orf120Q5SQS8 335 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 CYB5D1Q6P9G0 228 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 OTUD7AQ8TE49 926 aaPredicted RBP18.03■□□□□ 0.48
SMAD4-201ENST00000342988 PRH1P02810 166 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 UBE2SQ16763 222 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 HERC6Q8IVU3 1022 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 COL17A1Q9UMD9 1497 aaPredicted RBP18.03■□□□□ 0.48
SMAD4-201ENST00000342988 PVALEFA0A1B0GWK0 134 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 PTGES3LE9PB15 166 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 ODC1P11926 461 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 LIFRP42702 1097 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 DCP1BQ8IZD4 617 aaKnown RBP18.03■□□□□ 0.48
SMAD4-201ENST00000342988 BLOC1S5Q8TDH9 187 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 SLC12A4Q9UP95 1085 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 FARP2O94887 1054 aaPredicted RBP18.03■□□□□ 0.48
SMAD4-201ENST00000342988 H2AFXP16104 143 aaPredicted RBP18.03■□□□□ 0.48
SMAD4-201ENST00000342988 ZNF669Q96BR6 464 aaPredicted RBP18.03■□□□□ 0.48
SMAD4-201ENST00000342988 CNPPD1Q9BV87 410 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 NUP50Q9UKX7 468 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 GRIP1Q9Y3R0 1128 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 INPP4BO15327 924 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 IL18R1Q13478 541 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 TMEM216Q9P0N5 145 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 ARHGEF12Q9NZN5 1544 aa18.03■□□□□ 0.48
SMAD4-201ENST00000342988 H7C4K7 107 aa18.02■□□□□ 0.48
SMAD4-201ENST00000342988 SLC26A3P40879 764 aa18.02■□□□□ 0.48
SMAD4-201ENST00000342988 CDH4P55283 916 aa18.02■□□□□ 0.48
SMAD4-201ENST00000342988 RASA2Q15283 850 aa18.02■□□□□ 0.48
SMAD4-201ENST00000342988 QRFPRQ96P65 431 aa18.02■□□□□ 0.48
SMAD4-201ENST00000342988 SAMD4AQ9UPU9 718 aaKnown RBP18.02■□□□□ 0.48
SMAD4-201ENST00000342988 RSL1D1O76021 490 aaKnown RBP18.02■□□□□ 0.48
SMAD4-201ENST00000342988 PTH1RQ03431 593 aa18.02■□□□□ 0.48
SMAD4-201ENST00000342988 ATG14Q6ZNE5 492 aa18.02■□□□□ 0.48
SMAD4-201ENST00000342988 SGF29Q96ES7 293 aa18.02■□□□□ 0.48
SMAD4-201ENST00000342988 WDCPQ9H6R7 721 aa18.02■□□□□ 0.48
SMAD4-201ENST00000342988 ABCA10Q8WWZ4 1543 aa18.02■□□□□ 0.48
SMAD4-201ENST00000342988 ITGA2P17301 1181 aa18.02■□□□□ 0.48
SMAD4-201ENST00000342988 ASB2Q96Q27 587 aa18.02■□□□□ 0.48
SMAD4-201ENST00000342988 RXFP1Q9HBX9 757 aa18.02■□□□□ 0.48
SMAD4-201ENST00000342988 CROCC2H7BZ55 1655 aa18.02■□□□□ 0.48
SMAD4-201ENST00000342988 P4HBP07237 508 aaKnown RBP18.02■□□□□ 0.48
SMAD4-201ENST00000342988 RBM43Q6ZSC3 357 aaKnown RBP18.02■□□□□ 0.48
SMAD4-201ENST00000342988 FOXP4Q8IVH2 680 aaPredicted RBP18.02■□□□□ 0.48
SMAD4-201ENST00000342988 MAFFQ9ULX9 164 aa18.02■□□□□ 0.48
SMAD4-201ENST00000342988 SASH1O94885 1247 aa18.02■□□□□ 0.48
SMAD4-201ENST00000342988 ALOX5P09917 674 aa18.02■□□□□ 0.48
SMAD4-201ENST00000342988 TFDP3Q5H9I0 405 aa18.02■□□□□ 0.48
SMAD4-201ENST00000342988 GAS2L3Q86XJ1 694 aa18.02■□□□□ 0.48
SMAD4-201ENST00000342988 BTBD9Q96Q07 612 aa18.02■□□□□ 0.48
SMAD4-201ENST00000342988 ETAA1Q9NY74 926 aa18.02■□□□□ 0.48
SMAD4-201ENST00000342988 GPN3Q9UHW5 284 aaPredicted RBP18.02■□□□□ 0.48
SMAD4-201ENST00000342988 RPS6KL1Q9Y6S9 549 aa18.02■□□□□ 0.48
SMAD4-201ENST00000342988 FAM172BPA6NC97 362 aa18.02■□□□□ 0.47
SMAD4-201ENST00000342988 SKIV2L2P42285 1042 aaKnown RBP18.02■□□□□ 0.47
SMAD4-201ENST00000342988 PIK3CGP48736 1102 aa18.02■□□□□ 0.47
SMAD4-201ENST00000342988 ABRQ12979 859 aa18.02■□□□□ 0.47
SMAD4-201ENST00000342988 SLC18A3Q16572 532 aa18.02■□□□□ 0.47
SMAD4-201ENST00000342988 TMEM106CQ9BVX2 250 aa18.02■□□□□ 0.47
SMAD4-201ENST00000342988 GPRC5DQ9NZD1 345 aa18.02■□□□□ 0.47
SMAD4-201ENST00000342988 SSR3Q9UNL2 185 aa18.02■□□□□ 0.47
SMAD4-201ENST00000342988 EVPLQ92817 2033 aa18.02■□□□□ 0.47
SMAD4-201ENST00000342988 MCIDASD6RGH6 385 aa18.02■□□□□ 0.47
SMAD4-201ENST00000342988 SERPINA3P01011 423 aa18.02■□□□□ 0.47
SMAD4-201ENST00000342988 HOXC12P31275 282 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms