RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 TBXAS1P24557 533 aaPredicted RBP13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 IL12RB1P42701 662 aa13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 PRCPP42785 496 aa13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 PDE4CQ08493 712 aa13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 STIM1Q13586 685 aa13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 CUL2Q13617 745 aa13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 ZNF234Q14588 700 aa13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 TRIP4Q15650 581 aaPredicted RBP13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 GOLGA7BQ2TAP0 167 aa13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 ZNF658Q5TYW1 1059 aaPredicted RBP13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 SERPINA13PQ6UXR4 307 aa13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 FMNL3Q8IVF7 1028 aa13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 SMYD4Q8IYR2 804 aaPredicted RBP13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 SIX6OS1Q8N1H7 587 aa13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 DNASE2BQ8WZ79 361 aa13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 TMA16Q96EY4 203 aaKnown RBP13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 ULBP1Q9BZM6 244 aa13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 GOLPH3LQ9H4A5 285 aa13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 USP36Q9P275 1121 aaKnown RBP13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 ARMCX3Q9UH62 379 aaPredicted RBP13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 TSPAN16Q9UKR8 245 aa13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 COQ4Q9Y3A0 265 aa13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 MSRB2Q9Y3D2 182 aa13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 ZFYVE26Q68DK2 2539 aa13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 PCDH15Q96QU1 1955 aa13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 FRYQ5TBA9 3013 aa13.65□□□□□ -0.22
NECTIN1-203ENST00000341398 CKAP5Q14008 2032 aa13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 HYAL3O43820 417 aaPredicted RBP13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 LATS1O95835 1130 aa13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 TOP3BO95985 862 aaKnown RBP13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 SETSIPP0DME0 302 aa13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 CD59P13987 128 aa13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 MAOBP27338 520 aa13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 TPMTP51580 245 aa13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 LRRC63Q05C16 580 aa13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 CETN1Q12798 172 aa13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 TRIP6Q15654 476 aaKnown RBP13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 COBLL1Q53SF7 1204 aa13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 BSPRYQ5W0U4 402 aa13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 IL27RAQ6UWB1 636 aa13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 FAM217AQ8IXS0 508 aa13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 ZNF557Q8N988 423 aaPredicted RBP13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 WFIKKN2Q8TEU8 576 aa13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 GOLGA1Q92805 767 aa13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 ARID3AQ99856 593 aa13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 MKRN2Q9H000 416 aaKnown RBP13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 MIR1-1HGQ9H1L0 117 aa13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 PCED1AQ9H1Q7 454 aa13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 METTL14Q9HCE5 456 aaKnown RBP13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 CNGB3Q9NQW8 809 aa13.64□□□□□ -0.23
NECTIN1-203ENST00000341398 METTL12A8MUP2 240 aa13.63□□□□□ -0.23
NECTIN1-203ENST00000341398 ATP5BP06576 529 aaKnown RBP13.63□□□□□ -0.23
NECTIN1-203ENST00000341398 ADIGQ0VDE8 80 aa13.63□□□□□ -0.23
NECTIN1-203ENST00000341398 PNOCQ13519 176 aa13.63□□□□□ -0.23
NECTIN1-203ENST00000341398 CBWD6Q4V339 395 aa13.63□□□□□ -0.23
NECTIN1-203ENST00000341398 CBWD3Q5JTY5 395 aa13.63□□□□□ -0.23
NECTIN1-203ENST00000341398 CBWD5Q5RIA9 395 aa13.63□□□□□ -0.23
NECTIN1-203ENST00000341398 ADGRF1Q5T601 910 aa13.63□□□□□ -0.23
NECTIN1-203ENST00000341398 DCAF12L1Q5VU92 463 aa13.63□□□□□ -0.23
NECTIN1-203ENST00000341398 UNC45BQ8IWX7 931 aa13.63□□□□□ -0.23
NECTIN1-203ENST00000341398 SCML4Q8N228 414 aa13.63□□□□□ -0.23
NECTIN1-203ENST00000341398 OR2T3Q8NH03 318 aa13.63□□□□□ -0.23
NECTIN1-203ENST00000341398 KCTD13Q8WZ19 329 aa13.63□□□□□ -0.23
NECTIN1-203ENST00000341398 GATA6Q92908 595 aa13.63□□□□□ -0.23
NECTIN1-203ENST00000341398 SMARCE1Q969G3 411 aa13.63□□□□□ -0.23
NECTIN1-203ENST00000341398 IRX2Q9BZI1 471 aaPredicted RBP13.63□□□□□ -0.23
NECTIN1-203ENST00000341398 FBRSQ9HAH7 460 aa13.63□□□□□ -0.23
NECTIN1-203ENST00000341398 BCAT2O15382 392 aaPredicted RBP13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 SH3BP5O60239 455 aa13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 TSPAN3O60637 253 aa13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 CER1O95813 267 aa13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 IGLV3-19P01714 112 aa13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 PAEPP09466 180 aa13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 LCP1P13796 627 aa13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 PPP1R2P41236 205 aa13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 SLC11A2P49281 568 aa13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 GRIK2Q13002 908 aa13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 STILQ15468 1287 aa13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 FNDC3BQ53EP0 1204 aaKnown RBP13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 ANKRD40Q6AI12 368 aa13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 CCDC117Q8IWD4 279 aaPredicted RBP13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 OR2I1PQ8NGU4 316 aa13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 UBA3Q8TBC4 463 aa13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 EDEM1Q92611 657 aa13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 DDX50Q9BQ39 737 aaKnown RBP13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 GDPD2Q9HCC8 539 aa13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 CD93Q9NPY3 652 aa13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 SUN2Q9UH99 717 aa13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 SFMBT1Q9UHJ3 866 aa13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 APOBEC2Q9Y235 224 aaKnown RBP13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 ZZEF1O43149 2961 aa13.62□□□□□ -0.23
NECTIN1-203ENST00000341398 TYW5A2RUC4 315 aaKnown RBP13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 YJEFN3A6XGL0 299 aa13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 KCNJ18B7U540 433 aa13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 E7ENQ6 273 aa13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 TULP2O00295 520 aa13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 PSMA7O14818 248 aa13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 POLR2EP19388 210 aaKnown RBP13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 HOXD9P28356 352 aaPredicted RBP13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 MATKP42679 507 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms