RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 SLC9A3R1O14745 358 aaPredicted RBP11.92□□□□□ -0.5
ATXN3-201ENST00000340660 HOXC11O43248 304 aaPredicted RBP11.92□□□□□ -0.5
ATXN3-201ENST00000340660 NOL4O94818 638 aa11.92□□□□□ -0.5
ATXN3-201ENST00000340660 LIPCP11150 499 aa11.92□□□□□ -0.5
ATXN3-201ENST00000340660 NFKB1P19838 968 aa11.92□□□□□ -0.5
ATXN3-201ENST00000340660 IDH3AP50213 366 aa11.92□□□□□ -0.5
ATXN3-201ENST00000340660 OSTNP61366 133 aa11.92□□□□□ -0.5
ATXN3-201ENST00000340660 TRDNQ13061 729 aa11.92□□□□□ -0.5
ATXN3-201ENST00000340660 LRRTM3Q86VH5 581 aa11.92□□□□□ -0.5
ATXN3-201ENST00000340660 KIAA1958Q8N8K9 716 aa11.92□□□□□ -0.5
ATXN3-201ENST00000340660 WDR36Q8NI36 951 aaKnown RBP11.92□□□□□ -0.5
ATXN3-201ENST00000340660 PRCCQ92733 491 aaPredicted RBP11.92□□□□□ -0.5
ATXN3-201ENST00000340660 TRMT2BQ96GJ1 504 aaKnown RBP11.92□□□□□ -0.5
ATXN3-201ENST00000340660 MYRFLQ96LU7 910 aa11.92□□□□□ -0.5
ATXN3-201ENST00000340660 SLC12A9Q9BXP2 914 aa11.92□□□□□ -0.5
ATXN3-201ENST00000340660 POLR3FQ9H1D9 316 aaPredicted RBP11.92□□□□□ -0.5
ATXN3-201ENST00000340660 GDF3Q9NR23 364 aa11.92□□□□□ -0.5
ATXN3-201ENST00000340660 ABI2Q9NYB9 513 aaPredicted RBP11.92□□□□□ -0.5
ATXN3-201ENST00000340660 SEL1LQ9UBV2 794 aa11.92□□□□□ -0.5
ATXN3-201ENST00000340660 ENTPD4Q9Y227 616 aa11.92□□□□□ -0.5
ATXN3-201ENST00000340660 TAF6LQ9Y6J9 622 aa11.92□□□□□ -0.5
ATXN3-201ENST00000340660 STON1Q9Y6Q2 735 aa11.92□□□□□ -0.5
ATXN3-201ENST00000340660 ZNF469Q96JG9 3925 aaPredicted RBP11.92□□□□□ -0.5
ATXN3-201ENST00000340660 PRR19A6NJB7 356 aa11.91□□□□□ -0.5
ATXN3-201ENST00000340660 SDC3O75056 442 aa11.91□□□□□ -0.5
ATXN3-201ENST00000340660 IGHV4-34P06331 123 aa11.91□□□□□ -0.5
ATXN3-201ENST00000340660 ACADMP11310 421 aa11.91□□□□□ -0.5
ATXN3-201ENST00000340660 CKMT1AP12532 417 aa11.91□□□□□ -0.5
ATXN3-201ENST00000340660 TYMPP19971 482 aa11.91□□□□□ -0.5
ATXN3-201ENST00000340660 TGM2P21980 687 aa11.91□□□□□ -0.5
ATXN3-201ENST00000340660 YARSP54577 528 aaKnown RBP11.91□□□□□ -0.5
ATXN3-201ENST00000340660 STARD3Q14849 445 aa11.91□□□□□ -0.5
ATXN3-201ENST00000340660 EIF2S3LQ2VIR3 472 aaKnown RBP11.91□□□□□ -0.5
ATXN3-201ENST00000340660 TMC6Q7Z403 805 aa11.91□□□□□ -0.5
ATXN3-201ENST00000340660 C4orf19Q8IY42 314 aa11.91□□□□□ -0.5
ATXN3-201ENST00000340660 SPATA3Q8NHX4 192 aa11.91□□□□□ -0.5
ATXN3-201ENST00000340660 GRAMD1AQ96CP6 724 aa11.91□□□□□ -0.5
ATXN3-201ENST00000340660 MYO19Q96H55 970 aa11.91□□□□□ -0.5
ATXN3-201ENST00000340660 LXNQ9BS40 222 aa11.91□□□□□ -0.5
ATXN3-201ENST00000340660 CCDC113Q9H0I3 377 aa11.91□□□□□ -0.5
ATXN3-201ENST00000340660 TOPORSQ9NS56 1045 aaPredicted RBP11.91□□□□□ -0.5
ATXN3-201ENST00000340660 CNTN3Q9P232 1028 aa11.91□□□□□ -0.5
ATXN3-201ENST00000340660 UXTQ9UBK9 157 aaPredicted RBP11.91□□□□□ -0.5
ATXN3-201ENST00000340660 PCDHGA7Q9Y5G6 932 aa11.91□□□□□ -0.5
ATXN3-201ENST00000340660 A0A1W2PR77 199 aa11.9□□□□□ -0.5
ATXN3-201ENST00000340660 ACKR2O00590 384 aa11.9□□□□□ -0.5
ATXN3-201ENST00000340660 WNT9AO14904 365 aa11.9□□□□□ -0.5
ATXN3-201ENST00000340660 SEMA4FO95754 770 aa11.9□□□□□ -0.5
ATXN3-201ENST00000340660 P4HBP07237 508 aaKnown RBP11.9□□□□□ -0.5
ATXN3-201ENST00000340660 GP1BAP07359 652 aa11.9□□□□□ -0.5
ATXN3-201ENST00000340660 LIG1P18858 919 aa11.9□□□□□ -0.5
ATXN3-201ENST00000340660 ADRA1BP35368 520 aa11.9□□□□□ -0.5
ATXN3-201ENST00000340660 BCAT1P54687 386 aa11.9□□□□□ -0.5
ATXN3-201ENST00000340660 BTBD8Q5XKL5 378 aa11.9□□□□□ -0.5
ATXN3-201ENST00000340660 GRAMD4Q6IC98 578 aa11.9□□□□□ -0.5
ATXN3-201ENST00000340660 DHX32Q7L7V1 743 aaKnown RBP11.9□□□□□ -0.5
ATXN3-201ENST00000340660 OTUD6AQ7L8S5 288 aa11.9□□□□□ -0.5
ATXN3-201ENST00000340660 TICAM2Q86XR7 235 aa11.9□□□□□ -0.5
ATXN3-201ENST00000340660 SPPL2BQ8TCT7 592 aa11.9□□□□□ -0.5
ATXN3-201ENST00000340660 MAPK15Q8TD08 544 aa11.9□□□□□ -0.5
ATXN3-201ENST00000340660 ABCG4Q9H172 646 aa11.9□□□□□ -0.5
ATXN3-201ENST00000340660 RPF1Q9H9Y2 349 aaKnown RBP11.9□□□□□ -0.5
ATXN3-201ENST00000340660 EBF2Q9HAK2 575 aa11.9□□□□□ -0.5
ATXN3-201ENST00000340660 SMPD4Q9NXE4 827 aa11.9□□□□□ -0.5
ATXN3-201ENST00000340660 CFAP97Q9P2B7 532 aa11.9□□□□□ -0.5
ATXN3-201ENST00000340660 CSPG4Q6UVK1 2322 aa11.89□□□□□ -0.51
ATXN3-201ENST00000340660 COL6A5A8TX70 2615 aa11.89□□□□□ -0.51
ATXN3-201ENST00000340660 LY6G6EA0A0G2JKS1 128 aa11.89□□□□□ -0.51
ATXN3-201ENST00000340660 DKC1O60832 514 aaKnown RBP eCLIP11.89□□□□□ -0.51
ATXN3-201ENST00000340660 NADKO95544 446 aaPredicted RBP11.89□□□□□ -0.51
ATXN3-201ENST00000340660 EPB42P16452 691 aa11.89□□□□□ -0.51
ATXN3-201ENST00000340660 SLC6A4P31645 630 aa11.89□□□□□ -0.51
ATXN3-201ENST00000340660 NXPH1P58417 271 aa11.89□□□□□ -0.51
ATXN3-201ENST00000340660 SAFBQ15424 915 aaKnown RBP eCLIP11.89□□□□□ -0.51
ATXN3-201ENST00000340660 LACTB2Q53H82 288 aaPredicted RBP11.89□□□□□ -0.51
ATXN3-201ENST00000340660 XP32Q5T750 250 aa11.89□□□□□ -0.51
ATXN3-201ENST00000340660 NT5DC1Q5TFE4 455 aa11.89□□□□□ -0.51
ATXN3-201ENST00000340660 DSTYKQ6XUX3 929 aa11.89□□□□□ -0.51
ATXN3-201ENST00000340660 REXO1Q8N1G1 1221 aaKnown RBP11.89□□□□□ -0.51
ATXN3-201ENST00000340660 SLC25A45Q8N413 288 aa11.89□□□□□ -0.51
ATXN3-201ENST00000340660 ETNPPLQ8TBG4 499 aa11.89□□□□□ -0.51
ATXN3-201ENST00000340660 C2orf15Q8WU43 125 aaKnown RBP11.89□□□□□ -0.51
ATXN3-201ENST00000340660 NUDT8Q8WV74 236 aa11.89□□□□□ -0.51
ATXN3-201ENST00000340660 SCFD1Q8WVM8 642 aa11.89□□□□□ -0.51
ATXN3-201ENST00000340660 ARRDC3Q96B67 414 aa11.89□□□□□ -0.51
ATXN3-201ENST00000340660 P2RY11Q96G91 374 aa11.89□□□□□ -0.51
ATXN3-201ENST00000340660 TRIM9Q9C026 710 aa11.89□□□□□ -0.51
ATXN3-201ENST00000340660 DNAJC17Q9NVM6 304 aaKnown RBP11.89□□□□□ -0.51
ATXN3-201ENST00000340660 CPQQ9Y646 472 aa11.89□□□□□ -0.51
ATXN3-201ENST00000340660 U3KQA8 63 aa11.89□□□□□ -0.51
ATXN3-201ENST00000340660 PRRC2CQ9Y520 2896 aaKnown RBP11.89□□□□□ -0.51
ATXN3-201ENST00000340660 MN1Q10571 1320 aaPredicted RBP11.88□□□□□ -0.51
ATXN3-201ENST00000340660 hCG_1984214I3L0E3 225 aa11.88□□□□□ -0.51
ATXN3-201ENST00000340660 NR1D1P20393 614 aa11.88□□□□□ -0.51
ATXN3-201ENST00000340660 PDX1P52945 283 aa11.88□□□□□ -0.51
ATXN3-201ENST00000340660 SLC7A9P82251 487 aa11.88□□□□□ -0.51
ATXN3-201ENST00000340660 DDR2Q16832 855 aa11.88□□□□□ -0.51
ATXN3-201ENST00000340660 TMEM25Q86YD3 366 aa11.88□□□□□ -0.51
ATXN3-201ENST00000340660 ZBTB8OSQ8IWT0 167 aa11.88□□□□□ -0.51
ATXN3-201ENST00000340660 ZNF713Q8N859 430 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms