RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 GK3PQ14409 553 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 CCDC14Q49A88 953 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 MYLK4Q86YV6 388 aaPredicted RBP16.63■□□□□ 0.25
SCARB1-202ENST00000339570 ST13P4Q8IZP2 240 aaPredicted RBP16.63■□□□□ 0.25
SCARB1-202ENST00000339570 B4GALNT2Q8NHY0 566 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 HPDLQ96IR7 371 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 CNPY3Q9BT09 278 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 ZNF831Q5JPB2 1677 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 KCNK1O00180 336 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 TBC1D12O60347 775 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 ATG7O95352 703 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 ARRB2P32121 409 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 GPD2P43304 727 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 ZNF143P52747 638 aaPredicted RBP16.63■□□□□ 0.25
SCARB1-202ENST00000339570 MRPS22P82650 360 aaKnown RBP16.63■□□□□ 0.25
SCARB1-202ENST00000339570 DEUP1Q05D60 604 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 SNX31Q8N9S9 440 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 GSDMBQ8TAX9 411 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 GORASP1Q9BQQ3 440 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 INPP5FQ9Y2H2 1132 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 TRIP11Q15643 1979 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 CHADO15335 359 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 MAGEC1O60732 1142 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 VTNP04004 478 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 NUMBP49757 651 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 RAP1GDS1P52306 607 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 PDE1CQ14123 709 aaPredicted RBP16.63■□□□□ 0.25
SCARB1-202ENST00000339570 OLFML2BQ68BL8 750 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 HEATR6Q6AI08 1181 aaKnown RBP16.63■□□□□ 0.25
SCARB1-202ENST00000339570 FAM83AQ86UY5 434 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 SPATA6LQ8N4H0 392 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 C7orf26Q96N11 449 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 XPNPEP3Q9NQH7 507 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 THAP1Q9NVV9 213 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 UBP1Q9NZI7 540 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 PDP2Q9P2J9 529 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 PCDHGC3Q9UN70 934 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 SNX9Q9Y5X1 595 aa16.63■□□□□ 0.25
SCARB1-202ENST00000339570 LY75O60449 1722 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 SERPINA6P08185 405 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 STAG3L1P0CL83 205 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 DPEP1P16444 411 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 IL4RP24394 825 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 GRIA2P42262 883 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 NUDT2P50583 147 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 RPS6KA3P51812 740 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 LIN52Q52LA3 116 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 PPP1R26Q5T8A7 1209 aaPredicted RBP16.62■□□□□ 0.25
SCARB1-202ENST00000339570 TRIM42Q8IWZ5 723 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 CDT1Q9H211 546 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 SIRPGQ9P1W8 387 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 NDC80O14777 642 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 MAFGO15525 162 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 ATP9BO43861 1147 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 HSPA4LO95757 839 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 ALDOAP04075 364 aaKnown RBP16.62■□□□□ 0.25
SCARB1-202ENST00000339570 GSTA2P09210 222 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 ENO3P13929 434 aaPredicted RBP16.62■□□□□ 0.25
SCARB1-202ENST00000339570 CCNIQ14094 377 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 TEDDM1Q5T9Z0 273 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 EFCAB12Q6NXP0 572 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 MAVSQ7Z434 540 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 NDNQ99608 321 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 MMADHCQ9H3L0 296 aaPredicted RBP16.62■□□□□ 0.25
SCARB1-202ENST00000339570 HES2Q9Y543 173 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 STX16-NPEPL1H3BU86 382 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 RTN3O95197 1032 aaPredicted RBP16.62■□□□□ 0.25
SCARB1-202ENST00000339570 PTPN7P35236 360 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 AVPR1AP37288 418 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 ZSCAN18Q8TBC5 510 aaPredicted RBP16.62■□□□□ 0.25
SCARB1-202ENST00000339570 SIGLEC10Q96LC7 697 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 TEPSINQ96N21 525 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 EBNA1BP2Q99848 306 aaKnown RBP16.62■□□□□ 0.25
SCARB1-202ENST00000339570 CENPKQ9BS16 269 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 AKT3Q9Y243 479 aa16.62■□□□□ 0.25
SCARB1-202ENST00000339570 SDR42E2A6NKP2 422 aa16.61■□□□□ 0.25
SCARB1-202ENST00000339570 C2CD4BA6NLJ0 364 aa16.61■□□□□ 0.25
SCARB1-202ENST00000339570 GOT1P17174 413 aa16.61■□□□□ 0.25
SCARB1-202ENST00000339570 MPZL3Q6UWV2 235 aa16.61■□□□□ 0.25
SCARB1-202ENST00000339570 CYP4V2Q6ZWL3 525 aaPredicted RBP16.61■□□□□ 0.25
SCARB1-202ENST00000339570 SPATA16Q9BXB7 569 aa16.61■□□□□ 0.25
SCARB1-202ENST00000339570 CDH22Q9UJ99 828 aa16.61■□□□□ 0.25
SCARB1-202ENST00000339570 RPL26L1Q9UNX3 145 aaKnown RBP16.61■□□□□ 0.25
SCARB1-202ENST00000339570 PPEF2O14830 753 aa16.61■□□□□ 0.25
SCARB1-202ENST00000339570 FAM189A1O60320 539 aa16.61■□□□□ 0.25
SCARB1-202ENST00000339570 FARP2O94887 1054 aaPredicted RBP16.61■□□□□ 0.25
SCARB1-202ENST00000339570 ARIH2O95376 493 aa16.61■□□□□ 0.25
SCARB1-202ENST00000339570 TPH1P17752 444 aa16.61■□□□□ 0.25
SCARB1-202ENST00000339570 IDH3AP50213 366 aa16.61■□□□□ 0.25
SCARB1-202ENST00000339570 IRF9Q00978 393 aa16.61■□□□□ 0.25
SCARB1-202ENST00000339570 PPP1R2P3Q6NXS1 205 aa16.61■□□□□ 0.25
SCARB1-202ENST00000339570 MICALL2Q8IY33 904 aa16.61■□□□□ 0.25
SCARB1-202ENST00000339570 PLD6Q8N2A8 252 aaKnown RBP16.61■□□□□ 0.25
SCARB1-202ENST00000339570 ZNF781Q8N8C0 355 aa16.61■□□□□ 0.25
SCARB1-202ENST00000339570 PPP2R3CQ969Q6 453 aa16.61■□□□□ 0.25
SCARB1-202ENST00000339570 IFT43Q96FT9 208 aa16.61■□□□□ 0.25
SCARB1-202ENST00000339570 MPP4Q96JB8 637 aa16.61■□□□□ 0.25
SCARB1-202ENST00000339570 GRIP2Q9C0E4 1043 aa16.61■□□□□ 0.25
SCARB1-202ENST00000339570 KLHL4Q9C0H6 718 aa16.61■□□□□ 0.25
SCARB1-202ENST00000339570 POMPQ9Y244 141 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms