RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 HSP90AA5PQ58FG0 334 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 SLFN13Q68D06 897 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 GPR153Q6NV75 609 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 ADGRD1Q6QNK2 874 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 USP43Q70EL4 1123 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 LYSMD3Q7Z3D4 306 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 CADM3Q8N126 398 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 PPP1R14CQ8TAE6 165 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 SLC20A1Q8WUM9 679 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 DCAKDQ8WVC6 231 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 ISOC1Q96CN7 298 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 BTBD6Q96KE9 485 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 PCDHB18PQ96TA0 734 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 NUP85Q9BW27 656 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 STRA6Q9BX79 667 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 UNKQ9C0B0 810 aaKnown RBP5.77□□□□□ -1.48
CSDE1-202ENST00000339438 KCNK4Q9NYG8 393 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 FETUBQ9UGM5 382 aa5.77□□□□□ -1.48
CSDE1-202ENST00000339438 ZNF106Q9H2Y7 1883 aaKnown RBP5.77□□□□□ -1.49
CSDE1-202ENST00000339438 DENND3A2RUS2 1198 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 KRBA1A5PL33 1030 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 FAM155BO75949 473 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 C1QAP02745 245 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 ERBB2P04626 1255 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 GJB1P08034 283 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 ZNF26P17031 533 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-202ENST00000339438 HOXD10P28358 340 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 TMED10P49755 219 aaKnown RBP5.77□□□□□ -1.49
CSDE1-202ENST00000339438 GPC3P51654 580 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 UBXN2AP68543 259 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 COG7P83436 770 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 SLC25A3Q00325 362 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 CDK18Q07002 472 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 OXA1LQ15070 435 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 TRIP13Q15645 432 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-202ENST00000339438 UBE2SQ16763 222 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 FAM26FQ5R3K3 315 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 C6orf52Q5T4I8 152 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 CARM1Q86X55 608 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 TMEM126BQ8IUX1 230 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 RHOT2Q8IXI1 618 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 ADAM33Q9BZ11 813 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 CDH22Q9UJ99 828 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 VAV3Q9UKW4 847 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 CCDC194A0A1B0GVG4 234 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 EXOC1LA0A1B0GW35 172 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 WDR91A4D1P6 747 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 RGS13O14921 159 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 MARCH6O60337 910 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 SRGAP2CP0DJJ0 459 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 SRGAP2BP0DMP2 458 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 FDX1P10109 184 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 UBL4AP11441 157 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 CD1EP15812 388 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 CDH3P22223 829 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 BMPR1AP36894 532 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 MLLT10P55197 1068 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 TXNL4AP83876 142 aaKnown RBP5.77□□□□□ -1.49
CSDE1-202ENST00000339438 UBAP2LQ14157 1087 aaKnown RBP5.77□□□□□ -1.49
CSDE1-202ENST00000339438 CYTH1Q15438 398 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 TARBP2Q15633 366 aaKnown RBP5.77□□□□□ -1.49
CSDE1-202ENST00000339438 TRIP10Q15642 601 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 NDUFA5Q16718 116 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 MDH1BQ5I0G3 518 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 ITPRIPL1Q6GPH6 555 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 PPP4R3CPQ6ZMV5 832 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 FAM126BQ8IXS8 530 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 ICA1LQ8NDH6 482 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 KBTBD7Q8WVZ9 684 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 HAS1Q92839 578 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 GJA10Q969M2 543 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 CDK5RAP3Q96JB5 506 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 ZNF778Q96MU6 729 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 APBA2Q99767 749 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 TCHPQ9BT92 498 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 DRC3Q9H069 523 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 ZNF395Q9H8N7 513 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-202ENST00000339438 SCUBE2Q9NQ36 999 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 TMEM260Q9NX78 707 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 SCHIP1Q9P0W5 487 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-202ENST00000339438 GCNT4Q9P109 453 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 ANAPC5Q9UJX4 755 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 ERGIC3Q9Y282 383 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 C7orf72A4D263 438 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 NFIBO00712 420 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 CNOT3O75175 753 aaKnown RBP5.77□□□□□ -1.49
CSDE1-202ENST00000339438 ZBTB11O95625 1053 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-202ENST00000339438 NR2F2P24468 414 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 BMXP51813 675 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 SLC18A2Q05940 514 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 KDSRQ06136 332 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 SELENBP1Q13228 472 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 DRAP1Q14919 205 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-202ENST00000339438 LETM2Q2VYF4 491 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 TKFCQ3LXA3 575 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 IYDQ6PHW0 289 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 CDHR3Q6ZTQ4 885 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 UBL4BQ8N7F7 174 aa5.77□□□□□ -1.49
CSDE1-202ENST00000339438 SP7Q8TDD2 431 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-202ENST00000339438 SLC5A5Q92911 643 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms