RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 ANP32DO95626 131 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 IFNB1P01574 187 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 LINC00271P0C7V0 271 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 ETS1P14921 441 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 CD19P15391 556 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 ZFXP17010 805 aaPredicted RBP11.16□□□□□ -0.62
RTN3-201ENST00000338850 CALB2P22676 271 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 CD52P31358 61 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 SERPINB9P50453 376 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 GDF10P55107 478 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 PLCB3Q01970 1234 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 PDE4CQ08493 712 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 GPM6BQ13491 265 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 PRKD1Q15139 912 aaPredicted RBP11.16□□□□□ -0.62
RTN3-201ENST00000338850 PCBP1Q15365 356 aaKnown RBP eCLIP11.16□□□□□ -0.621e-11■■■□□ 14.6
RTN3-201ENST00000338850 SEPT7Q16181 437 aaKnown RBP11.16□□□□□ -0.62
RTN3-201ENST00000338850 FNBP1LQ5T0N5 605 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 TTC39BQ5VTQ0 682 aaPredicted RBP11.16□□□□□ -0.62
RTN3-201ENST00000338850 ANKRD22Q5VYY1 191 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 C3orf62Q6ZUJ4 267 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 FAM47EQ6ZV65 393 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 SLC26A11Q86WA9 606 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 RFX6Q8HWS3 928 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 CDKL3Q8IVW4 592 aaPredicted RBP11.16□□□□□ -0.62
RTN3-201ENST00000338850 KIAA0319LQ8IZA0 1049 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 C4orf33Q8N1A6 199 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 FIBCD1Q8N539 461 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 TEX9Q8N6V9 391 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 C1orf127Q8N9H9 656 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 KCTD6Q8NC69 237 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 NSMCE1Q8WV22 266 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 LINC01599Q8WXQ3 324 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 N4BP2L2Q92802 583 aaPredicted RBP11.16□□□□□ -0.62
RTN3-201ENST00000338850 SKA1Q96BD8 255 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 STAMBPL1Q96FJ0 436 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 RNF157Q96PX1 679 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 FAM118BQ9BPY3 351 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 STN1Q9H668 368 aaKnown RBP11.16□□□□□ -0.62
RTN3-201ENST00000338850 MANSC1Q9H8J5 431 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 XPO7Q9UIA9 1087 aaKnown RBP11.16□□□□□ -0.62
RTN3-201ENST00000338850 ZFP69BQ9UJL9 534 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 SORCS3Q9UPU3 1222 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 LRRC42Q9Y546 428 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 TRPV2Q9Y5S1 764 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 SQORQ9Y6N5 450 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 MUC3AQ02505 3323 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 KAT6AQ92794 2004 aa11.16□□□□□ -0.62
RTN3-201ENST00000338850 SF3B1O75533 1304 aaKnown RBP eCLIP11.15□□□□□ -0.629e-12■■■■■ 31.6
RTN3-201ENST00000338850 SMIM35A0A1B0GVV1 85 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 TCRBV9S1A1TA0A576 114 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 TTLL13PA6NNM8 815 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 CCDC22O60826 627 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 PEX11AO75192 247 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 KRT37O76014 449 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 C22orf31O95567 290 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 MT-ND3P03897 115 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 INHBAP08476 426 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 T-ENOLP0DO92 83 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 MLNP12872 115 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 GNAZP19086 355 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 ADRA1DP25100 572 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 SSTR1P30872 391 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 PTPN9P43378 593 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 NR2C2P49116 596 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 RPL34P49207 117 aaKnown RBP11.15□□□□□ -0.62
RTN3-201ENST00000338850 CDK16Q00536 496 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 TMEM62Q0P6H9 643 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 AMHR2Q16671 573 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 MSS51Q4VC12 460 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 PKDCCQ504Y2 493 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 TIGD5Q53EQ6 642 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 CYP4A22Q5TCH4 519 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 MTHFD1LQ6UB35 978 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 TIFABQ6ZNK6 161 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 APBB1IPQ7Z5R6 666 aaPredicted RBP11.15□□□□□ -0.62
RTN3-201ENST00000338850 CLNKQ7Z7G1 428 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 ZBTB33Q86T24 672 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 PRUNE1Q86TP1 453 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 PSTKQ8IV42 348 aaKnown RBP11.15□□□□□ -0.62
RTN3-201ENST00000338850 UNC45BQ8IWX7 931 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.15□□□□□ -0.62
RTN3-201ENST00000338850 HACE1Q8IYU2 909 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 SPATA18Q8TC71 538 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 TCP10LQ8TDR4 215 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 ACMSDQ8TDX5 336 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 ADPGKQ9BRR6 497 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 TSSK1BQ9BXA7 367 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 SLC4A5Q9BY07 1137 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 GCOM2Q9BZD3 368 aaPredicted RBP11.15□□□□□ -0.62
RTN3-201ENST00000338850 ELOVL4Q9GZR5 314 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 KLC2Q9H0B6 622 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 SYNCQ9H7C4 482 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 KIF9Q9HAQ2 790 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 PLEKHA5Q9HAU0 1116 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 KCNK4Q9NYG8 393 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 DONSONQ9NYP3 566 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 RCOR3Q9P2K3 495 aaPredicted RBP11.15□□□□□ -0.62
RTN3-201ENST00000338850 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.15□□□□□ -0.62
RTN3-201ENST00000338850 IKBKGQ9Y6K9 419 aa11.15□□□□□ -0.62
RTN3-201ENST00000338850 XIRP2A4UGR9 3374 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms