RNA–Protein interactions for RNA: ENST00000336119.7

NLRP3-201, Transcript of NLR family pyrin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP3, Length 4,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-201ENST00000336119 TOP6BLQ8N6T0 577 aa9.54□□□□□ -0.88
NLRP3-201ENST00000336119 OR6P1Q8NGX9 317 aa9.54□□□□□ -0.88
NLRP3-201ENST00000336119 DUSP16Q9BY84 665 aa9.54□□□□□ -0.88
NLRP3-201ENST00000336119 Q9H521 79 aa9.54□□□□□ -0.88
NLRP3-201ENST00000336119 AAASQ9NRG9 546 aa9.54□□□□□ -0.88
NLRP3-201ENST00000336119 TRPV2Q9Y5S1 764 aa9.54□□□□□ -0.88
NLRP3-201ENST00000336119 CLUHO75153 1309 aa9.54□□□□□ -0.88
NLRP3-201ENST00000336119 KCNK1O00180 336 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 LTFP02788 710 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 SMPD1P17405 629 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 IVDP26440 423 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 AQP5P55064 265 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 GDF10P55107 478 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 NCALDP61601 193 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 PRAMEP78395 509 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 FASTKD1Q53R41 847 aaKnown RBP9.53□□□□□ -0.88
NLRP3-201ENST00000336119 ARHGAP17Q68EM7 881 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 RGMBQ6NW40 437 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 KYAT3Q6YP21 454 aaKnown RBP9.53□□□□□ -0.88
NLRP3-201ENST00000336119 ZNF467Q7Z7K2 595 aaPredicted RBP9.53□□□□□ -0.88
NLRP3-201ENST00000336119 GLIS1Q8NBF1 620 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 MCUQ8NE86 351 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 IPMKQ8NFU5 416 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 SMARCD1Q96GM5 515 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 MAML3Q96JK9 1138 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 SNX27Q96L92 541 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 GAD1Q99259 594 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 THTPAQ9BU02 230 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 CEP41Q9BYV8 373 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 TASP1Q9H6P5 420 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 BATF3Q9NR55 127 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 SCOCQ9UIL1 159 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 VANGL2Q9ULK5 521 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 FIS1Q9Y3D6 152 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 SCN9AQ15858 1988 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 RGPD3A6NKT7 1758 aaPredicted RBP9.53□□□□□ -0.88
NLRP3-201ENST00000336119 RGPD4Q7Z3J3 1758 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 CCDC78A2IDD5 438 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 MANSC4A6NHS7 340 aaPredicted RBP9.53□□□□□ -0.88
NLRP3-201ENST00000336119 CFLARO15519 480 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 AVILO75366 819 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 GOT1P17174 413 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 ELF1P32519 619 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 C1QTNF8P60827 252 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 MRPS5P82675 430 aaKnown RBP9.53□□□□□ -0.88
NLRP3-201ENST00000336119 NOGQ13253 232 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 SNX17Q15036 470 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 SLC25A52Q3SY17 297 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 SPANXN3Q5MJ09 141 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 OTOAQ7RTW8 1153 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 STRA8Q7Z7C7 330 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 WDTC1Q8N5D0 677 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 NAT8LQ8N9F0 302 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 STKLD1Q8NE28 680 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 PPP1R13LQ8WUF5 828 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 HDAC11Q96DB2 347 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 CMTM5Q96DZ9 223 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 IFT43Q96FT9 208 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 VAT1Q99536 393 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 SDCBP2Q9H190 292 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 VRTNQ9H8Y1 702 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 THAP1Q9NVV9 213 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 RCOR3Q9P2K3 495 aaPredicted RBP9.53□□□□□ -0.88
NLRP3-201ENST00000336119 EPS15L1Q9UBC2 864 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 SLC39A10Q9ULF5 831 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 MYH9P35579 1960 aaKnown RBP9.53□□□□□ -0.88
NLRP3-201ENST00000336119 CASTOR2A6NHX0 329 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 C2CD2LO14523 706 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 PAPSS1O43252 624 aaPredicted RBP9.53□□□□□ -0.88
NLRP3-201ENST00000336119 DAB1O75553 588 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 ASMTLO95671 621 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 GEMP55040 296 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 KCNJ2P63252 427 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 EFTUD2Q15029 972 aaKnown RBP eCLIP9.53□□□□□ -0.88
NLRP3-201ENST00000336119 GRTP1Q5TC63 336 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 EDEM1Q92611 657 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 CSPG4P5Q96PW8 444 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 TTC1Q99614 292 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 EIF2AQ9BY44 585 aaKnown RBP9.53□□□□□ -0.88
NLRP3-201ENST00000336119 PRDM12Q9H4Q4 367 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 PCDHA11Q9Y5I1 949 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.53□□□□□ -0.88
NLRP3-201ENST00000336119 CCDC160A6NGH7 325 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 ERI2A8K979 691 aaKnown RBP9.53□□□□□ -0.88
NLRP3-201ENST00000336119 FCHO1O14526 889 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 TADA2AO75478 443 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 GMNNO75496 209 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 TPSB2P20231 275 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 CPA2P48052 419 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 NPY2RP49146 381 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 RAB27AP51159 221 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 SLC18A1P54219 525 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 BNIP1Q12981 228 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 MPP3Q13368 585 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 TPSAB1Q15661 275 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 WASHC2DQ5SRD0 308 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 N4BP2L1Q5TBK1 243 aaPredicted RBP9.53□□□□□ -0.88
NLRP3-201ENST00000336119 KIAA1841Q6NSI8 718 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 ADAM32Q8TC27 787 aa9.53□□□□□ -0.88
NLRP3-201ENST00000336119 SOCS4Q8WXH5 440 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms