RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 TINF2Q9BSI4 451 aa15.33■□□□□ 0.04
UBA1-201ENST00000335972 PLLPQ9Y342 182 aa15.33■□□□□ 0.04
UBA1-201ENST00000335972 ZNF638Q14966 1978 aaKnown RBP15.32■□□□□ 0.04
UBA1-201ENST00000335972 RNF103O00237 685 aa15.32■□□□□ 0.04
UBA1-201ENST00000335972 KHDC1Q4VXA5 237 aaKnown RBP15.32■□□□□ 0.04
UBA1-201ENST00000335972 PAN2Q504Q3 1202 aaKnown RBP15.32■□□□□ 0.04
UBA1-201ENST00000335972 WSCD1Q658N2 575 aa15.32■□□□□ 0.04
UBA1-201ENST00000335972 ADGRF2Q8IZF7 708 aa15.32■□□□□ 0.04
UBA1-201ENST00000335972 APPL2Q8NEU8 664 aa15.32■□□□□ 0.04
UBA1-201ENST00000335972 E2F7Q96AV8 911 aa15.32■□□□□ 0.04
UBA1-201ENST00000335972 CLPTM1LQ96KA5 538 aa15.32■□□□□ 0.04
UBA1-201ENST00000335972 SSU72Q9NP77 194 aaKnown RBP15.32■□□□□ 0.04
UBA1-201ENST00000335972 UBP1Q9NZI7 540 aa15.32■□□□□ 0.04
UBA1-201ENST00000335972 FETUBQ9UGM5 382 aa15.32■□□□□ 0.04
UBA1-201ENST00000335972 GOLGA8TH3BQL2 631 aa15.32■□□□□ 0.04
UBA1-201ENST00000335972 MDM4O15151 490 aa15.32■□□□□ 0.04
UBA1-201ENST00000335972 MYCNP04198 464 aaPredicted RBP15.32■□□□□ 0.04
UBA1-201ENST00000335972 SKIV2L2P42285 1042 aaKnown RBP15.32■□□□□ 0.04
UBA1-201ENST00000335972 BCAT1P54687 386 aa15.32■□□□□ 0.04
UBA1-201ENST00000335972 AQP5P55064 265 aa15.32■□□□□ 0.04
UBA1-201ENST00000335972 ZBTB6Q15916 424 aa15.32■□□□□ 0.04
UBA1-201ENST00000335972 DPYSL2Q16555 572 aa15.32■□□□□ 0.04
UBA1-201ENST00000335972 DCAF4L1Q3SXM0 396 aa15.32■□□□□ 0.04
UBA1-201ENST00000335972 PPP1R14CQ8TAE6 165 aa15.32■□□□□ 0.04
UBA1-201ENST00000335972 SHKBP1Q8TBC3 707 aa15.32■□□□□ 0.04
UBA1-201ENST00000335972 TEKT4Q8WW24 435 aa15.32■□□□□ 0.04
UBA1-201ENST00000335972 OXNAD1Q96HP4 312 aaPredicted RBP15.32■□□□□ 0.04
UBA1-201ENST00000335972 KCNK16Q96T55 309 aa15.32■□□□□ 0.04
UBA1-201ENST00000335972 ARHGEF4Q9NR80 690 aa15.32■□□□□ 0.04
UBA1-201ENST00000335972 NUP205Q92621 2012 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.31■□□□□ 0.04
UBA1-201ENST00000335972 I3L4J1 428 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 GYG2O15488 501 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 MYL3P08590 195 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 DESP17661 470 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 ARL4AP40617 200 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 CDK16Q00536 496 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 TREML1Q86YW5 311 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 GSDMBQ8TAX9 411 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 TFB1MQ8WVM0 346 aaKnown RBP15.31■□□□□ 0.04
UBA1-201ENST00000335972 PGBD4Q96DM1 585 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 RILPQ96NA2 401 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 ANLNQ9NQW6 1124 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 CNTN3Q9P232 1028 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 ESRRAP11474 423 aaPredicted RBP15.31■□□□□ 0.04
UBA1-201ENST00000335972 DARSP14868 501 aaKnown RBP15.31■□□□□ 0.04
UBA1-201ENST00000335972 PTPN4P29074 926 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 P2RY11Q96G91 374 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 PRDM12Q9H4Q4 367 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.31■□□□□ 0.04
UBA1-201ENST00000335972 NRP1O14786 923 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 ITM2AO43736 263 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 NUMBP49757 651 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 KPNB1Q14974 876 aaKnown RBP15.31■□□□□ 0.04
UBA1-201ENST00000335972 CCL14Q16627 93 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 TWF2Q6IBS0 349 aaKnown RBP15.31■□□□□ 0.04
UBA1-201ENST00000335972 SLC26A9Q7LBE3 791 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 AGR3Q8TD06 166 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 EDEM1Q92611 657 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 LPPQ93052 612 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 SYBUQ9NX95 663 aa15.31■□□□□ 0.04
UBA1-201ENST00000335972 MEI4A8MW99 385 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 HUS1O60921 280 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 KRT36O76013 467 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 UBAP2LQ14157 1087 aaKnown RBP15.3■□□□□ 0.04
UBA1-201ENST00000335972 STILQ15468 1287 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 TAF11Q15544 211 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 KIAA0319Q5VV43 1072 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 CMC1Q7Z7K0 106 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 ZNF410Q86VK4 478 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 SHCBP1Q8NEM2 672 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 SLC7A14Q8TBB6 771 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 WDR60Q8WVS4 1066 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 RTP4Q96DX8 246 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 RSRC1Q96IZ7 334 aaKnown RBP15.3■□□□□ 0.04
UBA1-201ENST00000335972 UBQLN1Q9UMX0 589 aaKnown RBP15.3■□□□□ 0.04
UBA1-201ENST00000335972 H3BRJ5 948 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 TPP1O14773 563 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 PRKCHP24723 683 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 IFRD2Q12894 506 aaPredicted RBP15.3■□□□□ 0.04
UBA1-201ENST00000335972 SNX17Q15036 470 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 OLFML2BQ68BL8 750 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 DPY19L2Q6NUT2 758 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 PID1Q7Z2X4 250 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 RSPH3Q86UC2 560 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 B3GALNT2Q8NCR0 500 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 MCUR1Q96AQ8 359 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 NSL1Q96IY1 281 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 MS4A4AQ96JQ5 239 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 QKIQ96PU8 341 aaKnown RBP eCLIP15.3■□□□□ 0.042e-9■■■■■ 49.6
UBA1-201ENST00000335972 PIGVQ9NUD9 493 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 SMAPO00193 183 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 KRT38O76015 456 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 CTSHP09668 335 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 CACNA2D1P54289 1103 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 OTUD1Q5VV17 481 aaPredicted RBP15.3■□□□□ 0.04
UBA1-201ENST00000335972 RNF139Q8WU17 664 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 SKA1Q96BD8 255 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 RNPEPL1Q9HAU8 725 aa15.3■□□□□ 0.04
UBA1-201ENST00000335972 FLRT1Q9NZU1 646 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms