RNA–Protein interactions for RNA: ENST00000334634.8

TRIM46-201, Transcript of tripartite motif containing 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM46, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-201ENST00000334634 CFAP36Q96G28 342 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 C11orf84Q9BUA3 381 aaPredicted RBP13.21□□□□□ -0.29
TRIM46-201ENST00000334634 ETNK1Q9HBU6 452 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 PCDH9Q9HC56 1237 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.21□□□□□ -0.29
TRIM46-201ENST00000334634 UBP1Q9NZI7 540 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 STK38LQ9Y2H1 464 aa13.21□□□□□ -0.29
TRIM46-201ENST00000334634 PDCD11Q14690 1871 aaKnown RBP13.21□□□□□ -0.29
TRIM46-201ENST00000334634 UGT1A9O60656 530 aa13.21□□□□□ -0.3
TRIM46-201ENST00000334634 TBX18O95935 607 aa13.21□□□□□ -0.3
TRIM46-201ENST00000334634 ELK3P41970 407 aa13.21□□□□□ -0.3
TRIM46-201ENST00000334634 AP1B1Q10567 949 aa13.21□□□□□ -0.3
TRIM46-201ENST00000334634 HIF1AQ16665 826 aa13.21□□□□□ -0.3
TRIM46-201ENST00000334634 MAP3K21Q5TCX8 1036 aa13.21□□□□□ -0.3
TRIM46-201ENST00000334634 NCBP2-AS2Q69YL0 99 aa13.21□□□□□ -0.3
TRIM46-201ENST00000334634 PRPF39Q86UA1 669 aaKnown RBP13.21□□□□□ -0.3
TRIM46-201ENST00000334634 ANKS4BQ8N8V4 417 aa13.21□□□□□ -0.3
TRIM46-201ENST00000334634 NAT8LQ8N9F0 302 aa13.21□□□□□ -0.3
TRIM46-201ENST00000334634 RSPH1Q8WYR4 309 aa13.21□□□□□ -0.3
TRIM46-201ENST00000334634 CCDC77Q9BR77 488 aa13.21□□□□□ -0.3
TRIM46-201ENST00000334634 UGT1A7Q9HAW7 530 aa13.21□□□□□ -0.3
TRIM46-201ENST00000334634 UGT1A10Q9HAW8 530 aa13.21□□□□□ -0.3
TRIM46-201ENST00000334634 UGT1A8Q9HAW9 530 aa13.21□□□□□ -0.3
TRIM46-201ENST00000334634 UBN1Q9NPG3 1134 aa13.21□□□□□ -0.3
TRIM46-201ENST00000334634 NKIRAS1Q9NYS0 192 aa13.21□□□□□ -0.3
TRIM46-201ENST00000334634 GIT1Q9Y2X7 761 aa13.21□□□□□ -0.3
TRIM46-201ENST00000334634 KPNA6O60684 536 aa13.2□□□□□ -0.3
TRIM46-201ENST00000334634 ALDH1A1P00352 501 aa13.2□□□□□ -0.3
TRIM46-201ENST00000334634 RPL17P18621 184 aaKnown RBP13.2□□□□□ -0.3
TRIM46-201ENST00000334634 DAOAP59103 153 aa13.2□□□□□ -0.3
TRIM46-201ENST00000334634 STILQ15468 1287 aa13.2□□□□□ -0.3
TRIM46-201ENST00000334634 BOLA3Q53S33 107 aa13.2□□□□□ -0.3
TRIM46-201ENST00000334634 WLSQ5T9L3 541 aa13.2□□□□□ -0.3
TRIM46-201ENST00000334634 C3orf62Q6ZUJ4 267 aa13.2□□□□□ -0.3
TRIM46-201ENST00000334634 PCSK9Q8NBP7 692 aaKnown RBP13.2□□□□□ -0.3
TRIM46-201ENST00000334634 TTC16Q8NEE8 873 aa13.2□□□□□ -0.3
TRIM46-201ENST00000334634 APOL2Q9BQE5 337 aa13.2□□□□□ -0.3
TRIM46-201ENST00000334634 FAM167BQ9BTA0 163 aa13.2□□□□□ -0.3
TRIM46-201ENST00000334634 ABCF3Q9NUQ8 709 aa13.2□□□□□ -0.3
TRIM46-201ENST00000334634 FARP1Q9Y4F1 1045 aaPredicted RBP13.2□□□□□ -0.3
TRIM46-201ENST00000334634 HHLA1C9JL84 531 aa13.2□□□□□ -0.3
TRIM46-201ENST00000334634 SETSIPP0DME0 302 aa13.2□□□□□ -0.3
TRIM46-201ENST00000334634 GRIK1P39086 918 aa13.2□□□□□ -0.3
TRIM46-201ENST00000334634 PCBP1Q15365 356 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRIM46-201ENST00000334634 TAS1R1Q7RTX1 841 aa13.2□□□□□ -0.3
TRIM46-201ENST00000334634 KIF2BQ8N4N8 673 aa13.2□□□□□ -0.3
TRIM46-201ENST00000334634 TGS1Q96RS0 853 aaKnown RBP13.2□□□□□ -0.3
TRIM46-201ENST00000334634 GPR62Q9BZJ7 368 aa13.2□□□□□ -0.3
TRIM46-201ENST00000334634 ACTR5Q9H9F9 607 aaPredicted RBP13.2□□□□□ -0.3
TRIM46-201ENST00000334634 HMX1Q9NP08 348 aaPredicted RBP13.2□□□□□ -0.3
TRIM46-201ENST00000334634 ARHGEF4Q9NR80 690 aa13.2□□□□□ -0.3
TRIM46-201ENST00000334634 TBC1D13Q9NVG8 400 aa13.2□□□□□ -0.3
TRIM46-201ENST00000334634 DRG1Q9Y295 367 aaKnown RBP13.2□□□□□ -0.3
TRIM46-201ENST00000334634 TTLL3Q9Y4R7 772 aa13.2□□□□□ -0.3
TRIM46-201ENST00000334634 SPTBN5Q9NRC6 3674 aaKnown RBP13.2□□□□□ -0.3
TRIM46-201ENST00000334634 NEFHP12036 1026 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 ELF3P78545 371 aaPredicted RBP13.19□□□□□ -0.3
TRIM46-201ENST00000334634 VSTM1Q6UX27 236 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 BHLHA9Q7RTU4 235 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 ZNF598Q86UK7 904 aaKnown RBP13.19□□□□□ -0.3
TRIM46-201ENST00000334634 NPWQ8N729 165 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 FBF1Q8TES7 1133 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 USP33Q8TEY7 942 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 PYROXD1Q8WU10 500 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 RNF34Q969K3 372 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 SLC38A7Q9NVC3 462 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 RALGAPA2Q2PPJ7 1873 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 E2F8A0AVK6 867 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 C2CD2LO14523 706 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 ATP6V1G2O95670 118 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 USP46P62068 366 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 TUSC3Q13454 348 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 SLC25A52Q3SY17 297 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 RSPO2Q6UXX9 243 aaPredicted RBP13.19□□□□□ -0.3
TRIM46-201ENST00000334634 CCDC63Q8NA47 563 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 KCNV2Q8TDN2 545 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 RSRC1Q96IZ7 334 aaKnown RBP13.19□□□□□ -0.3
TRIM46-201ENST00000334634 HSFY1Q96LI6 401 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 OSER1Q9NX31 292 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 FZD10Q9ULW2 581 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 EME2A4GXA9 379 aaPredicted RBP13.19□□□□□ -0.3
TRIM46-201ENST00000334634 C9IYK1 514 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 SLC8A3P57103 927 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 YWHAGP61981 247 aaKnown RBP eCLIP13.19□□□□□ -0.3
TRIM46-201ENST00000334634 PTK7Q13308 1070 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 ARMC3Q5W041 872 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 ARHGAP36Q6ZRI8 547 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 KDELC2Q7Z4H8 507 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 MRPL10Q7Z7H8 261 aaKnown RBP13.19□□□□□ -0.3
TRIM46-201ENST00000334634 RNF139Q8WU17 664 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 NPY6RQ99463 290 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 PLCD4Q9BRC7 762 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 CRISPLD1Q9H336 500 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 NMUR1Q9HB89 426 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 WDR6Q9NNW5 1121 aaKnown RBP13.19□□□□□ -0.3
TRIM46-201ENST00000334634 NDFIP2Q9NV92 336 aa13.19□□□□□ -0.3
TRIM46-201ENST00000334634 CEP290O15078 2479 aa13.18□□□□□ -0.3
TRIM46-201ENST00000334634 DNAH14Q0VDD8 3507 aa13.18□□□□□ -0.3
TRIM46-201ENST00000334634 KBTBD13C9JR72 458 aa13.18□□□□□ -0.3
TRIM46-201ENST00000334634 DPYSL4O14531 572 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms