RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 PAOXQ6QHF9 649 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 ZFP28Q8NHY6 868 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 RAB3IL1Q8TBN0 382 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 CYP26B1Q9NR63 512 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 PGAP2Q9UHJ9 254 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 CNTN6Q9UQ52 1028 aa14.15□□□□□ -0.14
SYNE3-201ENST00000334258 LDHAP00338 332 aaKnown RBP14.14□□□□□ -0.15
SYNE3-201ENST00000334258 IDH3AP50213 366 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 YWHAEP62258 255 aaKnown RBP14.14□□□□□ -0.15
SYNE3-201ENST00000334258 MRPS22P82650 360 aaKnown RBP14.14□□□□□ -0.15
SYNE3-201ENST00000334258 PRKCEQ02156 737 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 CYTH1Q15438 398 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 FAM83AQ86UY5 434 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 CLEC4DQ8WXI8 215 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 ZNF778Q96MU6 729 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 SGIP1Q9BQI5 828 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 NIF3L1Q9GZT8 377 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 HAPLN2Q9GZV7 340 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 ZNF408Q9H9D4 720 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 UBAP1Q9NZ09 502 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 PCDHGB4Q9UN71 923 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 PCDHGB5Q9Y5G0 923 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 AP4B1Q9Y6B7 739 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 GREB1LQ9C091 1923 aaPredicted RBP14.14□□□□□ -0.15
SYNE3-201ENST00000334258 SMIM18P0DKX4 95 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 BCAR1P56945 870 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 PGM2L1Q6PCE3 622 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 PPP1R36Q96LQ0 422 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 PNPLA8Q9NP80 782 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 SLC15A5A6NIM6 579 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 ASS1P00966 412 aaKnown RBP14.14□□□□□ -0.15
SYNE3-201ENST00000334258 KRT19P08727 400 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 PRKCHP24723 683 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 NUDT2P50583 147 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 ZNF132P52740 706 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 CDK18Q07002 472 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 NOMO1Q15155 1222 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 MYLK3Q32MK0 819 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 CAND1Q86VP6 1230 aaKnown RBP14.14□□□□□ -0.15
SYNE3-201ENST00000334258 RNF168Q8IYW5 571 aaPredicted RBP14.14□□□□□ -0.15
SYNE3-201ENST00000334258 RNF148Q8N7C7 305 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 GSDMBQ8TAX9 411 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 TFB1MQ8WVM0 346 aaKnown RBP14.14□□□□□ -0.15
SYNE3-201ENST00000334258 PDCD2LQ9BRP1 358 aa14.14□□□□□ -0.15
SYNE3-201ENST00000334258 MKI67P46013 3256 aaKnown RBP14.13□□□□□ -0.15
SYNE3-201ENST00000334258 LAMA3Q16787 3333 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 DNAJA2O60884 412 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 TNFAIP8O95379 198 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 CRTAMO95727 393 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 TNFAIP1Q13829 316 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 GK3PQ14409 553 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 FAM102AQ5T9C2 384 aaPredicted RBP14.13□□□□□ -0.15
SYNE3-201ENST00000334258 OLFML1Q6UWY5 402 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 C10orf107Q8IVU9 208 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 MPP5Q8N3R9 675 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 CMASQ8NFW8 434 aaPredicted RBP14.13□□□□□ -0.15
SYNE3-201ENST00000334258 ZFRQ96KR1 1074 aaKnown RBP14.13□□□□□ -0.15
SYNE3-201ENST00000334258 ADPGKQ9BRR6 497 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 COPS7BQ9H9Q2 264 aaPredicted RBP14.13□□□□□ -0.15
SYNE3-201ENST00000334258 SLC17A6Q9P2U8 582 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 SYNPO2Q9UMS6 1093 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 SF3B1O75533 1304 aaKnown RBP eCLIP14.13□□□□□ -0.15
SYNE3-201ENST00000334258 A0A0J9YVX5 310 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 TTLL13PA6NNM8 815 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 SPDYE16A6NNV3 312 aaPredicted RBP14.13□□□□□ -0.15
SYNE3-201ENST00000334258 NOP56O00567 594 aaKnown RBP14.13□□□□□ -0.15
SYNE3-201ENST00000334258 DKC1O60832 514 aaKnown RBP eCLIP14.13□□□□□ -0.15
SYNE3-201ENST00000334258 SUPT3HO75486 399 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 NPM3O75607 178 aaKnown RBP14.13□□□□□ -0.15
SYNE3-201ENST00000334258 GRAP2O75791 330 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 SERPINE1P05121 402 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 PSAPP07602 524 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 COX4I1P13073 169 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 SERPINB5P36952 375 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 SERPINB9P50453 376 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 ENPEPQ07075 957 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 TUBB3Q13509 450 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 DCTN2Q13561 401 aaKnown RBP14.13□□□□□ -0.15
SYNE3-201ENST00000334258 ZNF699Q32M78 642 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 FSCBQ5H9T9 825 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 C6orf52Q5T4I8 152 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 SH3PXD2AQ5TCZ1 1133 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 EEPD1Q7L9B9 569 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 UNC5BQ8IZJ1 945 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 METTL25Q8N6Q8 603 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 APBB2Q92870 758 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 ZBED3Q96IU2 234 aaPredicted RBP14.13□□□□□ -0.15
SYNE3-201ENST00000334258 CPXM1Q96SM3 734 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 ARPC5LQ9BPX5 153 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 SIKE1Q9BRV8 207 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 R3HDMLQ9H3Y0 253 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 EPB41L1Q9H4G0 881 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 GPATCH2LQ9NWQ4 482 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 TXNDC16Q9P2K2 825 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 PSMD13Q9UNM6 376 aa14.13□□□□□ -0.15
SYNE3-201ENST00000334258 HMX2A2RU54 273 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 FZD9O00144 591 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 PRPSAP2O60256 369 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 DGKIO75912 1065 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 TRUB2O95900 331 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms