RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 GTF2IP78347 998 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 ATP2C1P98194 919 aaPredicted RBP10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 SCN1BQ07699 218 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 DRAP1Q14919 205 aaPredicted RBP10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 TBCELQ5QJ74 424 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 RNF220Q5VTB9 566 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 ZNF746Q6NUN9 644 aaPredicted RBP10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 ZNF677Q86XU0 584 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 GAL3ST3Q96A11 431 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 WRNIP1Q96S55 665 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 AMNQ9BXJ7 453 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 SP140LQ9H930 580 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 UBP1Q9NZI7 540 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 ATP10AO60312 1499 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 H7C2Y5 167 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 PSMD11O00231 422 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 ALDH1A2O94788 518 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 TUFMP49411 452 aaKnown RBP10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 NME5P56597 212 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 AP3S2P59780 193 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 NUP214P35658 2090 aaPredicted RBP10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 CLRN2A0PK11 232 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 PGDP52209 483 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 DDX39BQ13838 428 aaKnown RBP10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 SNX32Q86XE0 403 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 CKAP2Q8WWK9 683 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 KCTD14Q9BQ13 255 aaPredicted RBP10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 STAP1Q9ULZ2 295 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 N6AMT1Q9Y5N5 214 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 IQGAP3Q86VI3 1631 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 ARID1BQ8NFD5 2236 aaPredicted RBP10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 CLDN3O15551 220 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 DLG1Q12959 904 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 MTHFSDQ2M296 383 aaKnown RBP10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 CACHD1Q5VU97 1274 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 TCEAL3Q969E4 200 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 PPIEQ9UNP9 301 aaKnown RBP10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 MROH7-TTC4A0A0A0MT08 1334 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 MDM4O15151 490 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 KCTD2Q14681 263 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 SMU1Q2TAY7 513 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 EGFLAMQ63HQ2 1017 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 DCAF15Q66K64 600 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 PTRHD1Q6GMV3 140 aaKnown RBP10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 EEPD1Q7L9B9 569 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 PIDD1Q9HB75 910 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 ATP10BO94823 1461 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 DDX3XO00571 662 aaKnown RBP eCLIP10.58□□□□□ -0.724e-32■■■■□ 19.7
SPTBN1-201ENST00000333896 EYA4O95677 639 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 ITGA2BP08514 1039 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 VCLP18206 1134 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 PTPN7P35236 360 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 GPC3P51654 580 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 TPI1P60174 286 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 BST2Q10589 180 aaKnown RBP10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 AP3B2Q13367 1082 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 SLFN13Q68D06 897 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 MSANTD3Q96H12 275 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 Q96MT0 163 aa10.58□□□□□ -0.72
SPTBN1-201ENST00000333896 LOC100506127A0A0U1RQW1 187 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 FGFR2P21802 821 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 RAD51Q06609 339 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 GCKRQ14397 625 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 ANKRD23Q86SG2 305 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 TRPV1Q8NER1 839 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 CLTBP09497 229 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 FXR1P51114 621 aaKnown RBP eCLIP10.57□□□□□ -0.722e-6■■□□□ 13.9
SPTBN1-201ENST00000333896 CACNB2Q08289 660 aaPredicted RBP10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 DPYDQ12882 1025 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 RIPOR1Q6ZS17 1223 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 NECAB2Q7Z6G3 386 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 SPERTQ8NA61 448 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 AP1S3Q96PC3 154 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 C11orf70Q9BRQ4 267 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 SLC39A3Q9BRY0 314 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 CCDC177Q9NQR7 707 aaPredicted RBP10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 PADI4Q9UM07 663 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 SNX8Q9Y5X2 465 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 CCDC154A6NI56 674 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 PSMD12O00232 456 aaPredicted RBP10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 OR6B1O95007 311 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 IFNA14P01570 189 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 S100A2P29034 98 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 HSD17B4P51659 736 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 PYDC2Q56P42 97 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 TXNDC11Q6PKC3 985 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 RNF38Q9H0F5 515 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 KDM6AO15550 1401 aaPredicted RBP10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 CD109Q6YHK3 1445 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 ATRXP46100 2492 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 ZBTB5O15062 677 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 SNX4O95219 450 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 NADKO95544 446 aaPredicted RBP10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 ANXA11P50995 505 aaKnown RBP10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 MAPK10P53779 464 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 PERM1Q5SV97 790 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 DUS1LQ6P1R4 473 aaKnown RBP10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 KCNK18Q7Z418 384 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 DNAAF5Q86Y56 855 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms