RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 SEPT7Q16181 437 aaKnown RBP16.42■□□□□ 0.22
PDGFB-201ENST00000331163 KYNUQ16719 465 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 TUBB8Q3ZCM7 444 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 RAP1GAP2Q684P5 730 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 COLGALT2Q8IYK4 626 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 ZBED8Q8IZ13 594 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 SUSD3Q96L08 255 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 ACBD6Q9BR61 282 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 GDAP2Q9NXN4 497 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 SPG21Q9NZD8 308 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 E2F8A0AVK6 867 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 PFKMP08237 780 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 GBP1P32455 592 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 SCTRP47872 440 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 BOLA3Q53S33 107 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 MAB21L3Q8N8X9 362 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 GLIS1Q8NBF1 620 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 ATL2Q8NHH9 583 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 PIK3R5Q8WYR1 880 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 PEBP4Q96S96 227 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 SMG9Q9H0W8 520 aaKnown RBP16.42■□□□□ 0.22
PDGFB-201ENST00000331163 PIGVQ9NUD9 493 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 SLC12A6Q9UHW9 1150 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 PARP14Q460N5 1801 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 C2CD4BA6NLJ0 364 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 ATP9BO43861 1147 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 WARSP23381 471 aaKnown RBP16.42■□□□□ 0.22
PDGFB-201ENST00000331163 USP46P62068 366 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 ANKS1BQ7Z6G8 1248 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 CACUL1Q86Y37 369 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 CRYBG2Q8N1P7 616 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 ANKRD42Q8N9B4 389 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 TTC8Q8TAM2 541 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 GRK7Q8WTQ7 553 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 TCF25Q9BQ70 676 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 CCSER2Q9H7U1 834 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 DDX56Q9NY93 547 aaKnown RBP16.42■□□□□ 0.22
PDGFB-201ENST00000331163 MARCH2Q9P0N8 246 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 MCM8Q9UJA3 840 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 PITPNM1O00562 1244 aa16.41■□□□□ 0.22
PDGFB-201ENST00000331163 TLR5O60602 858 aa16.41■□□□□ 0.22
PDGFB-201ENST00000331163 IGFBP4P22692 258 aa16.41■□□□□ 0.22
PDGFB-201ENST00000331163 RBL1P28749 1068 aa16.41■□□□□ 0.22
PDGFB-201ENST00000331163 PREPLQ4J6C6 727 aaPredicted RBP16.41■□□□□ 0.22
PDGFB-201ENST00000331163 TP53INP2Q8IXH6 220 aa16.41■□□□□ 0.22
PDGFB-201ENST00000331163 STAMBPL1Q96FJ0 436 aa16.41■□□□□ 0.22
PDGFB-201ENST00000331163 SGSM3Q96HU1 749 aa16.41■□□□□ 0.22
PDGFB-201ENST00000331163 RARGP13631 454 aa16.41■□□□□ 0.22
PDGFB-201ENST00000331163 MATKP42679 507 aa16.41■□□□□ 0.22
PDGFB-201ENST00000331163 RPL21P46778 160 aaKnown RBP16.41■□□□□ 0.22
PDGFB-201ENST00000331163 CRADDP78560 199 aa16.41■□□□□ 0.22
PDGFB-201ENST00000331163 SEPT6Q14141 434 aa16.41■□□□□ 0.22
PDGFB-201ENST00000331163 CNKSR3Q6P9H4 555 aa16.41■□□□□ 0.22
PDGFB-201ENST00000331163 OLFML1Q6UWY5 402 aa16.41■□□□□ 0.22
PDGFB-201ENST00000331163 NUP93Q8N1F7 819 aa16.41■□□□□ 0.22
PDGFB-201ENST00000331163 KLHL23Q8NBE8 558 aa16.41■□□□□ 0.22
PDGFB-201ENST00000331163 EXD1Q8NHP7 514 aa16.41■□□□□ 0.22
PDGFB-201ENST00000331163 ACTRT1Q8TDG2 376 aa16.41■□□□□ 0.22
PDGFB-201ENST00000331163 HSFY1Q96LI6 401 aa16.41■□□□□ 0.22
PDGFB-201ENST00000331163 ELAC2Q9BQ52 826 aaKnown RBP16.41■□□□□ 0.22
PDGFB-201ENST00000331163 ERP44Q9BS26 406 aa16.41■□□□□ 0.22
PDGFB-201ENST00000331163 ETNK2Q9NVF9 386 aa16.41■□□□□ 0.22
PDGFB-201ENST00000331163 PSTPIP1O43586 416 aa16.4■□□□□ 0.22
PDGFB-201ENST00000331163 CHRM1P11229 460 aaPredicted RBP16.4■□□□□ 0.22
PDGFB-201ENST00000331163 PDIA2Q13087 525 aaKnown RBP16.4■□□□□ 0.22
PDGFB-201ENST00000331163 DSC3Q14574 896 aa16.4■□□□□ 0.22
PDGFB-201ENST00000331163 ANKS3Q6ZW76 656 aa16.4■□□□□ 0.22
PDGFB-201ENST00000331163 TAC4Q86UU9 113 aa16.4■□□□□ 0.22
PDGFB-201ENST00000331163 EPAS1Q99814 870 aa16.4■□□□□ 0.22
PDGFB-201ENST00000331163 MTIF3Q9H2K0 278 aaKnown RBP16.4■□□□□ 0.22
PDGFB-201ENST00000331163 H3BRJ5 948 aa16.4■□□□□ 0.22
PDGFB-201ENST00000331163 GLUD2P49448 558 aa16.4■□□□□ 0.22
PDGFB-201ENST00000331163 PGFP49763 221 aa16.4■□□□□ 0.22
PDGFB-201ENST00000331163 HDAC4P56524 1084 aa16.4■□□□□ 0.22
PDGFB-201ENST00000331163 TWF1Q12792 350 aa16.4■□□□□ 0.22
PDGFB-201ENST00000331163 ANKRD20A8PQ5CZ79 823 aa16.4■□□□□ 0.22
PDGFB-201ENST00000331163 TRNP1Q6NT89 227 aa16.4■□□□□ 0.22
PDGFB-201ENST00000331163 DENND1CQ8IV53 801 aa16.4■□□□□ 0.22
PDGFB-201ENST00000331163 CCDC117Q8IWD4 279 aaPredicted RBP16.4■□□□□ 0.22
PDGFB-201ENST00000331163 SLC22A17Q8WUG5 538 aa16.4■□□□□ 0.22
PDGFB-201ENST00000331163 KIF1CO43896 1103 aaKnown RBP16.4■□□□□ 0.22
PDGFB-201ENST00000331163 STK10O94804 968 aaKnown RBP16.4■□□□□ 0.22
PDGFB-201ENST00000331163 JCHAINP01591 159 aa16.4■□□□□ 0.22
PDGFB-201ENST00000331163 NOS2P35228 1153 aa16.4■□□□□ 0.22
PDGFB-201ENST00000331163 TUBP50607 506 aa16.4■□□□□ 0.22
PDGFB-201ENST00000331163 ELAVL2Q12926 359 aaKnown RBP16.4■□□□□ 0.22
PDGFB-201ENST00000331163 IL31Q6EBC2 164 aa16.4■□□□□ 0.22
PDGFB-201ENST00000331163 TMC5Q6UXY8 1006 aa16.4■□□□□ 0.22
PDGFB-201ENST00000331163 PAQR9Q6ZVX9 377 aa16.4■□□□□ 0.22
PDGFB-201ENST00000331163 RSRC1Q96IZ7 334 aaKnown RBP16.4■□□□□ 0.22
PDGFB-201ENST00000331163 CASD1Q96PB1 797 aa16.4■□□□□ 0.22
PDGFB-201ENST00000331163 AAASQ9NRG9 546 aa16.4■□□□□ 0.22
PDGFB-201ENST00000331163 LCHNA4D1U4 455 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 PMPCBO75439 489 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 KRT15P19012 456 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 PEX5P50542 639 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 DAOAP59103 153 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 PPP2R2AP63151 447 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 CLUL1Q15846 466 aa16.39■□□□□ 0.21
PDGFB-201ENST00000331163 UNC45BQ8IWX7 931 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms