RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 CALN1Q9BXU9 219 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 ATXN3LQ9H3M9 355 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 IGFLR1Q9H665 355 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 TRPC7Q9HCX4 862 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 SOBPA7XYQ1 873 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 NRG2O14511 850 aaPredicted RBP10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 DDX6P26196 483 aaKnown RBP eCLIP10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 ZNF135P52742 658 aaPredicted RBP10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 ITIH3Q06033 890 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 SEMA3BQ13214 749 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 PRSS36Q5K4E3 855 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 PRPF38BQ5VTL8 546 aaKnown RBP10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 PYROXD2Q8N2H3 581 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 MAIP1Q8WWC4 291 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 SMG7Q92540 1137 aaKnown RBP10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 FAF2Q96CS3 445 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 RPGRIP1Q96KN7 1286 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 HERPUD2Q9BSE4 406 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 KLF16Q9BXK1 252 aaPredicted RBP10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 RNF38Q9H0F5 515 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 OSBPL2Q9H1P3 480 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 C2orf16Q68DN1 1984 aa10.62□□□□□ -0.71
VIPAS39-201ENST00000327028 CLUHO75153 1309 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 CTAGE15A4D2H0 777 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 H3BRJ5 948 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 MOSPD3O75425 235 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 PAGE1O75459 146 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 SLU7O95391 586 aaKnown RBP10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 CTAGE8P0CG41 777 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 MBL2P11226 248 aaPredicted RBP10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 POU3F3P20264 500 aaPredicted RBP10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 COG7P83436 770 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 KLF1Q13351 362 aaPredicted RBP10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 ARHGAP15Q53QZ3 475 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 PPP6R3Q5H9R7 873 aaPredicted RBP10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 NUGGCQ68CJ6 796 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 TXNDC8Q6A555 127 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 GRASPQ7Z6J2 395 aaPredicted RBP10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 CTAGE6Q86UF2 777 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 CTAGE4Q8IX94 777 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 ATP6V0D2Q8N8Y2 350 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 TCEAL4Q96EI5 215 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 PIDD1Q9HB75 910 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 DOCK6Q96HP0 2047 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 TRAV19A0A0A6YYK7 116 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 ZNF197O14709 1029 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 TJP3O95049 919 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 MOCS2O96007 188 aaPredicted RBP10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 KRT10P13645 584 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 IL4RP24394 825 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 ARL4AP40617 200 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 SLC7A9P82251 487 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 NRG1Q02297 640 aaPredicted RBP10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 MMRN1Q13201 1228 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 GRIN2CQ14957 1233 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 SLC5A9Q2M3M2 681 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 ACBD5Q5T8D3 534 aaPredicted RBP10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 ANKRD54Q6NXT1 300 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 BBS12Q6ZW61 710 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 UNC45BQ8IWX7 931 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 C12orf76Q8N812 135 aaPredicted RBP10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 ARL14EPQ8N8R7 260 aaPredicted RBP10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 SPATA4Q8NEY3 305 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 ZFRQ96KR1 1074 aaKnown RBP10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 BTN2A3PQ96KV6 586 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 CSPG4P5Q96PW8 444 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 EPAS1Q99814 870 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 HEMGNQ9BXL5 484 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 MAGEB5Q9BZ81 275 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 SLC12A6Q9UHW9 1150 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 ZMYM5Q9UJ78 669 aa10.61□□□□□ -0.71
VIPAS39-201ENST00000327028 GOLGA6L10A0A0M3HER8 536 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 TCRBV7S2A1N4TA0A589 114 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 KRIT1O00522 736 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 LINC01565O15544 149 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 HMBSP08397 361 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 GJA1P17302 382 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 HDCP19113 662 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 HTR7P34969 479 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 NTHL1P78549 312 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 TFDP2Q14188 446 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 SIX1Q15475 284 aaPredicted RBP10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 TEAD2Q15562 447 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 ANKRD20A8PQ5CZ79 823 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 RARS2Q5T160 578 aaKnown RBP10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 STXBP5Q5T5C0 1151 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 GPR158Q5T848 1215 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 KAZNQ674X7 775 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 TMC5Q6UXY8 1006 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 RFX6Q8HWS3 928 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 RNF157Q96PX1 679 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 SLC22A12Q96S37 553 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 PRDM16Q9HAZ2 1276 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 CWC15Q9P013 229 aaKnown RBP10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 MTCH2Q9Y6C9 303 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 PRRC2BQ5JSZ5 2229 aaKnown RBP10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 FAM72CH0Y354 149 aa10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 EEF2KO00418 725 aaKnown RBP10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 SOX1O00570 391 aaPredicted RBP10.6□□□□□ -0.71
VIPAS39-201ENST00000327028 STC2O76061 302 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms