RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 PDE9AO76083 593 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 GJA8P48165 433 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 PTDSS1P48651 473 aaKnown RBP8.09□□□□□ -1.11
CIITA-201ENST00000324288 CCR4P51679 360 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 RNF44Q7L0R7 432 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 ACOT1Q86TX2 421 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 TCP10LQ8TDR4 215 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 MRPS7Q9Y2R9 242 aaKnown RBP8.09□□□□□ -1.11
CIITA-201ENST00000324288 PCDHGA4Q9Y5G9 962 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 CASZ1Q86V15 1759 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 SNTNA6NMZ2 147 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 A8MX80 341 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 H7C1W4 665 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 GH1P01241 217 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 TSPAN19P0C672 248 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 TPH1P17752 444 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 STIP1P31948 543 aaKnown RBP8.09□□□□□ -1.11
CIITA-201ENST00000324288 ARF3P61204 181 aaPredicted RBP8.09□□□□□ -1.11
CIITA-201ENST00000324288 ARF1P84077 181 aaKnown RBP8.09□□□□□ -1.11
CIITA-201ENST00000324288 RHAGQ02094 409 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 ATP6AP1LQ52LC2 224 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 ANGEL2Q5VTE6 544 aaKnown RBP8.09□□□□□ -1.11
CIITA-201ENST00000324288 OLFML2AQ68BL7 652 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 FAM210AQ96ND0 272 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 RPRD1AQ96P16 312 aaPredicted RBP8.09□□□□□ -1.11
CIITA-201ENST00000324288 SEMA4AQ9H3S1 761 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 ATP7BP35670 1465 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 WDR27A2RRH5 827 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 CCDC182A6NF36 153 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 MGAT4DA6NG13 374 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 CD44P16070 742 aaKnown RBP8.09□□□□□ -1.11
CIITA-201ENST00000324288 GCLCP48506 637 aaPredicted RBP8.09□□□□□ -1.11
CIITA-201ENST00000324288 IER5Q5VY09 327 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 CELF6Q96J87 481 aaKnown RBP8.09□□□□□ -1.11
CIITA-201ENST00000324288 DMRTB1Q96MA1 342 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 RUSC1Q9BVN2 902 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 PRRG3Q9BZD7 231 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 SLC38A7Q9NVC3 462 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 ERVK-7P63135 1459 aa8.09□□□□□ -1.11
CIITA-201ENST00000324288 LDLRP01130 860 aa8.09□□□□□ -1.12
CIITA-201ENST00000324288 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.09□□□□□ -1.12
CIITA-201ENST00000324288 SEPT1Q8WYJ6 367 aa8.09□□□□□ -1.12
CIITA-201ENST00000324288 RABGEF1Q9UJ41 708 aa8.09□□□□□ -1.12
CIITA-201ENST00000324288 NUDT14O95848 222 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 FCGR1AP12314 374 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 FAM81AQ8TBF8 368 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 FBXO32Q969P5 355 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 SERAC1Q96JX3 654 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 APOL4Q9BPW4 351 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 RSAD1Q9HA92 442 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 NARFQ9UHQ1 456 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 DMGDHQ9UI17 866 aaKnown RBP8.08□□□□□ -1.12
CIITA-201ENST00000324288 CNOT7Q9UIV1 285 aaKnown RBP8.08□□□□□ -1.12
CIITA-201ENST00000324288 COQ6Q9Y2Z9 468 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 DYRK1BQ9Y463 629 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 A0A087X0T9 212 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.08□□□□□ -1.12
CIITA-201ENST00000324288 FAM228BP0C875 321 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 ZNF286BP0CG31 522 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 MYL12AP19105 171 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 CCNHP51946 323 aaPredicted RBP8.08□□□□□ -1.12
CIITA-201ENST00000324288 TOMM20Q15388 145 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 WDCPQ9H6R7 721 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 SH3BP4Q9P0V3 963 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 ATXN10Q9UBB4 475 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 TDRKHQ9Y2W6 561 aaKnown RBP8.08□□□□□ -1.12
CIITA-201ENST00000324288 MAP3K13O43283 966 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 CSDE1O75534 798 aaKnown RBP8.08□□□□□ -1.12
CIITA-201ENST00000324288 DGAT1O75907 488 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 TNFAIP8O95379 198 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 ODC1P11926 461 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 STARP49675 285 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 EN1Q05925 392 aaPredicted RBP8.08□□□□□ -1.12
CIITA-201ENST00000324288 SPIDRQ14159 915 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 NOTUMQ6P988 496 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 EID3Q8N140 333 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 LYVE1Q9Y5Y7 322 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 TRIOBPQ9H2D6 2365 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 SH3D21A4FU49 640 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 FOXP2O15409 715 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 CLTBP09497 229 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 LRPAP1P30533 357 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 ABCG1P45844 678 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 ARHGAP15Q53QZ3 475 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 AGAP9Q5VTM2 703 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 IKBIPQ70UQ0 350 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 PTAR1Q7Z6K3 402 aaPredicted RBP8.08□□□□□ -1.12
CIITA-201ENST00000324288 C3orf20Q8ND61 904 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 SLITRK1Q96PX8 696 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 LACRTQ9GZZ8 138 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 NUP205Q92621 2012 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 CNPP09543 421 aaKnown RBP8.08□□□□□ -1.12
CIITA-201ENST00000324288 MRPS22P82650 360 aaKnown RBP8.08□□□□□ -1.12
CIITA-201ENST00000324288 SULT1C3Q6IMI6 304 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 GLB1LQ6UWU2 654 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 FBXO25Q8TCJ0 367 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 LENG1Q96BZ8 264 aaPredicted RBP8.08□□□□□ -1.12
CIITA-201ENST00000324288 FAM120BQ96EK7 910 aaKnown RBP8.08□□□□□ -1.12
CIITA-201ENST00000324288 C8orf4Q9NR00 106 aa8.08□□□□□ -1.12
CIITA-201ENST00000324288 EURLQ9NYK6 297 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms