RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 RRN3Q9NYV6 651 aa19.06■□□□□ 0.64
USP39-201ENST00000323701 IL37Q9NZH6 218 aa19.06■□□□□ 0.64
USP39-201ENST00000323701 XPO7Q9UIA9 1087 aaKnown RBP19.06■□□□□ 0.64
USP39-201ENST00000323701 PLXNA3P51805 1871 aa19.06■□□□□ 0.64
USP39-201ENST00000323701 EEF2KO00418 725 aaKnown RBP19.06■□□□□ 0.64
USP39-201ENST00000323701 IRAK2O43187 625 aa19.06■□□□□ 0.64
USP39-201ENST00000323701 RIPK2O43353 540 aa19.06■□□□□ 0.64
USP39-201ENST00000323701 BANF1O75531 89 aa19.06■□□□□ 0.64
USP39-201ENST00000323701 TBX18O95935 607 aa19.06■□□□□ 0.64
USP39-201ENST00000323701 F9P00740 461 aa19.06■□□□□ 0.64
USP39-201ENST00000323701 MTM1Q13496 603 aa19.06■□□□□ 0.64
USP39-201ENST00000323701 HP1BP3Q5SSJ5 553 aaPredicted RBP19.06■□□□□ 0.64
USP39-201ENST00000323701 SPOUT1Q5T280 376 aaKnown RBP19.06■□□□□ 0.64
USP39-201ENST00000323701 ARTNQ5T4W7 220 aa19.06■□□□□ 0.64
USP39-201ENST00000323701 KCTD16Q68DU8 428 aa19.06■□□□□ 0.64
USP39-201ENST00000323701 BEND5Q7L4P6 421 aa19.06■□□□□ 0.64
USP39-201ENST00000323701 SH2D3CQ8N5H7 860 aa19.06■□□□□ 0.64
USP39-201ENST00000323701 GIPC2Q8TF65 315 aa19.06■□□□□ 0.64
USP39-201ENST00000323701 PRCCQ92733 491 aaPredicted RBP19.06■□□□□ 0.64
USP39-201ENST00000323701 OLFM3Q96PB7 478 aa19.06■□□□□ 0.64
USP39-201ENST00000323701 RUFY1Q96T51 708 aa19.06■□□□□ 0.64
USP39-201ENST00000323701 LGMNQ99538 433 aa19.06■□□□□ 0.64
USP39-201ENST00000323701 CLSTN3Q9BQT9 956 aa19.06■□□□□ 0.64
USP39-201ENST00000323701 MTRRQ9UBK8 725 aa19.06■□□□□ 0.64
USP39-201ENST00000323701 OR12D3Q9UGF7 316 aa19.06■□□□□ 0.64
USP39-201ENST00000323701 GREB1Q4ZG55 1949 aa19.06■□□□□ 0.64
USP39-201ENST00000323701 CHD9Q3L8U1 2897 aa19.06■□□□□ 0.64
USP39-201ENST00000323701 H7C4K7 107 aa19.05■□□□□ 0.64
USP39-201ENST00000323701 DCLK1O15075 740 aa19.05■□□□□ 0.64
USP39-201ENST00000323701 HAPLN1P10915 354 aaPredicted RBP19.05■□□□□ 0.64
USP39-201ENST00000323701 EN2P19622 333 aaPredicted RBP19.05■□□□□ 0.64
USP39-201ENST00000323701 FASTKD3Q14CZ7 662 aaKnown RBP19.05■□□□□ 0.64
USP39-201ENST00000323701 PSMD5Q16401 504 aa19.05■□□□□ 0.64
USP39-201ENST00000323701 RASIP1Q5U651 963 aa19.05■□□□□ 0.64
USP39-201ENST00000323701 SLC8B1Q6J4K2 584 aa19.05■□□□□ 0.64
USP39-201ENST00000323701 DENND5BQ6ZUT9 1274 aa19.05■□□□□ 0.64
USP39-201ENST00000323701 CCHCR1Q8TD31 782 aa19.05■□□□□ 0.64
USP39-201ENST00000323701 SMOC2Q9H3U7 446 aa19.05■□□□□ 0.64
USP39-201ENST00000323701 RCOR3Q9P2K3 495 aaPredicted RBP19.05■□□□□ 0.64
USP39-201ENST00000323701 BCLAF3A2AJT9 711 aaKnown RBP19.05■□□□□ 0.64
USP39-201ENST00000323701 H3BRJ5 948 aa19.05■□□□□ 0.64
USP39-201ENST00000323701 ACSL3O95573 720 aa19.05■□□□□ 0.64
USP39-201ENST00000323701 CAV1Q03135 178 aa19.05■□□□□ 0.64
USP39-201ENST00000323701 BTG3Q14201 252 aaPredicted RBP19.05■□□□□ 0.64
USP39-201ENST00000323701 SLMAPQ14BN4 828 aa19.05■□□□□ 0.64
USP39-201ENST00000323701 KYNUQ16719 465 aa19.05■□□□□ 0.64
USP39-201ENST00000323701 MON1AQ86VX9 555 aa19.05■□□□□ 0.64
USP39-201ENST00000323701 SLC39A11Q8N1S5 342 aa19.05■□□□□ 0.64
USP39-201ENST00000323701 ZCCHC9Q8N567 271 aaKnown RBP19.05■□□□□ 0.64
USP39-201ENST00000323701 SPPL2BQ8TCT7 592 aa19.05■□□□□ 0.64
USP39-201ENST00000323701 AUTS2Q8WXX7 1259 aa19.05■□□□□ 0.64
USP39-201ENST00000323701 FAM92AA1XBS5 289 aa19.04■□□□□ 0.64
USP39-201ENST00000323701 TMEM63AO94886 807 aa19.04■□□□□ 0.64
USP39-201ENST00000323701 LRIG2O94898 1065 aa19.04■□□□□ 0.64
USP39-201ENST00000323701 VAV1P15498 845 aa19.04■□□□□ 0.64
USP39-201ENST00000323701 ERCC2P18074 760 aa19.04■□□□□ 0.64
USP39-201ENST00000323701 STIP1P31948 543 aaKnown RBP19.04■□□□□ 0.64
USP39-201ENST00000323701 TAF10Q12962 218 aa19.04■□□□□ 0.64
USP39-201ENST00000323701 LRIG3Q6UXM1 1119 aa19.04■□□□□ 0.64
USP39-201ENST00000323701 NPWQ8N729 165 aa19.04■□□□□ 0.64
USP39-201ENST00000323701 CCDC110Q8TBZ0 833 aa19.04■□□□□ 0.64
USP39-201ENST00000323701 RNF34Q969K3 372 aa19.04■□□□□ 0.64
USP39-201ENST00000323701 RTP4Q96DX8 246 aa19.04■□□□□ 0.64
USP39-201ENST00000323701 RBM15Q96T37 977 aaKnown RBP eCLIP19.04■□□□□ 0.64
USP39-201ENST00000323701 TMEM106CQ9BVX2 250 aa19.04■□□□□ 0.64
USP39-201ENST00000323701 NEU3Q9UQ49 428 aa19.04■□□□□ 0.64
USP39-201ENST00000323701 SEC24AO95486 1093 aa19.03■□□□□ 0.64
USP39-201ENST00000323701 AIF1P55008 147 aa19.03■□□□□ 0.64
USP39-201ENST00000323701 MORF4L2Q15014 288 aa19.03■□□□□ 0.64
USP39-201ENST00000323701 SLC45A4Q5BKX6 768 aa19.03■□□□□ 0.64
USP39-201ENST00000323701 FAXCQ5TGI0 409 aa19.03■□□□□ 0.64
USP39-201ENST00000323701 NAT8LQ8N9F0 302 aa19.03■□□□□ 0.64
USP39-201ENST00000323701 BBOF1Q8ND07 529 aa19.03■□□□□ 0.64
USP39-201ENST00000323701 C9orf72Q96LT7 481 aa19.03■□□□□ 0.64
USP39-201ENST00000323701 SIK2Q9H0K1 926 aa19.03■□□□□ 0.64
USP39-201ENST00000323701 ARHGEF38Q9NXL2 777 aa19.03■□□□□ 0.64
USP39-201ENST00000323701 NUP205Q92621 2012 aa19.03■□□□□ 0.64
USP39-201ENST00000323701 OPA1O60313 960 aa19.03■□□□□ 0.64
USP39-201ENST00000323701 NUDT17P0C025 328 aa19.03■□□□□ 0.64
USP39-201ENST00000323701 ZFXP17010 805 aaPredicted RBP19.03■□□□□ 0.64
USP39-201ENST00000323701 YWHAQP27348 245 aa19.03■□□□□ 0.64
USP39-201ENST00000323701 NR2C2P49116 596 aa19.03■□□□□ 0.64
USP39-201ENST00000323701 MSS51Q4VC12 460 aa19.03■□□□□ 0.64
USP39-201ENST00000323701 SPDYCQ5MJ68 293 aa19.03■□□□□ 0.64
USP39-201ENST00000323701 UBE2Q1Q7Z7E8 422 aa19.03■□□□□ 0.64
USP39-201ENST00000323701 TMEM199Q8N511 208 aa19.03■□□□□ 0.64
USP39-201ENST00000323701 ZNF558Q96NG5 402 aa19.03■□□□□ 0.64
USP39-201ENST00000323701 FBXO44Q9H4M3 255 aa19.03■□□□□ 0.64
USP39-201ENST00000323701 NINJ2Q9NZG7 142 aa19.03■□□□□ 0.64
USP39-201ENST00000323701 SOD2P04179 222 aa19.02■□□□□ 0.64
USP39-201ENST00000323701 TPI1P60174 286 aa19.02■□□□□ 0.64
USP39-201ENST00000323701 BASP1P80723 227 aaKnown RBP19.02■□□□□ 0.64
USP39-201ENST00000323701 ARL13BQ3SXY8 428 aa19.02■□□□□ 0.64
USP39-201ENST00000323701 FNBP1LQ5T0N5 605 aa19.02■□□□□ 0.64
USP39-201ENST00000323701 DENND2CQ68D51 928 aa19.02■□□□□ 0.64
USP39-201ENST00000323701 KIAA1841Q6NSI8 718 aa19.02■□□□□ 0.64
USP39-201ENST00000323701 COLGALT1Q8NBJ5 622 aa19.02■□□□□ 0.64
USP39-201ENST00000323701 FBXO32Q969P5 355 aa19.02■□□□□ 0.64
USP39-201ENST00000323701 QKIQ96PU8 341 aaKnown RBP eCLIP19.02■□□□□ 0.64
USP39-201ENST00000323701 TMBIM4Q9HC24 238 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms