RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 AARS2Q5JTZ9 985 aaKnown RBP7.23□□□□□ -1.25
SMC1A-201ENST00000322213 DPY19L2Q6NUT2 758 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 USP17L6PQ6QN14 398 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 FAM172AQ8WUF8 416 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 AP3S1Q92572 193 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 POP5Q969H6 163 aaKnown RBP7.23□□□□□ -1.25
SMC1A-201ENST00000322213 NARS2Q96I59 477 aaKnown RBP7.23□□□□□ -1.25
SMC1A-201ENST00000322213 ROBO2Q9HCK4 1378 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 HTR3EA5X5Y0 456 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 INPP4BO15327 924 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 MYO1DO94832 1006 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 ADRA1DP25100 572 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 VAC14Q08AM6 782 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 ZYXQ15942 572 aaKnown RBP7.23□□□□□ -1.25
SMC1A-201ENST00000322213 PNPT1Q8TCS8 783 aaKnown RBP7.23□□□□□ -1.25
SMC1A-201ENST00000322213 RAB2BQ8WUD1 216 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 DHRS1Q96LJ7 313 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 DHX35Q9H5Z1 703 aaKnown RBP7.23□□□□□ -1.25
SMC1A-201ENST00000322213 CDH22Q9UJ99 828 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 PRG3Q9Y2Y8 225 aaPredicted RBP7.23□□□□□ -1.25
SMC1A-201ENST00000322213 EFCAB10A6NFE3 127 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 TMEM114B3SHH9 223 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 TBX3O15119 743 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 VPS4BO75351 444 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 RGS20O76081 388 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 PBX1P40424 430 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 GPC3P51654 580 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 PERM1Q5SV97 790 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 SGF29Q96ES7 293 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 CITED4Q96RK1 184 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 PLEKHA5Q9HAU0 1116 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 ABCB10Q9NRK6 738 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 DCDC2CA8MYV0 355 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 TPST1O60507 370 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 GH1P01241 217 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 PSMB9P28065 219 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 SSTR3P32745 418 aaPredicted RBP7.23□□□□□ -1.25
SMC1A-201ENST00000322213 IL6STP40189 918 aaPredicted RBP7.23□□□□□ -1.25
SMC1A-201ENST00000322213 ITGA1P56199 1179 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 FASTKQ14296 549 aaKnown RBP7.23□□□□□ -1.25
SMC1A-201ENST00000322213 NTRK3Q16288 839 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 MZT2BQ6NZ67 158 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 FNDC8Q8TC99 324 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 SLC39A3Q9BRY0 314 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 CDCA7Q9BWT1 371 aaPredicted RBP7.23□□□□□ -1.25
SMC1A-201ENST00000322213 TBC1D22BQ9NU19 505 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 PARP14Q460N5 1801 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 M0QX08 132 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 SLC16A4O15374 487 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 PIK3R1P27986 724 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 ADSSP30520 456 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 USP10Q14694 798 aaKnown RBP7.23□□□□□ -1.25
SMC1A-201ENST00000322213 C1QTNF12Q5T7M4 302 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 N4BP2L1Q5TBK1 243 aaPredicted RBP7.23□□□□□ -1.25
SMC1A-201ENST00000322213 NIPAL1Q6NVV3 410 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 ULK4Q96C45 1275 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 DCUN1D1Q96GG9 259 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 CDRT15Q96T59 188 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 VTA1Q9NP79 307 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 SLC39A10Q9ULF5 831 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 SPATA2Q9UM82 520 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 PSMD13Q9UNM6 376 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 JCADQ9P266 1359 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 ABCA1O95477 2261 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 SUPT3HB4E1H0 165 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 CST8O60676 142 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 QARSP47897 775 aaKnown RBP7.23□□□□□ -1.25
SMC1A-201ENST00000322213 GPR107Q5VW38 600 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 CRTC3Q6UUV7 619 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 RASGEF1CQ8N431 466 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 KBTBD8Q8NFY9 601 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 TRIM45Q9H8W5 580 aaPredicted RBP7.23□□□□□ -1.25
SMC1A-201ENST00000322213 TMEM260Q9NX78 707 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 EHD3Q9NZN3 535 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 PRKAG3Q9UGI9 489 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 ITGA11Q9UKX5 1188 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 USP18Q9UMW8 372 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 TEX28O15482 410 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 CCNG1P51959 295 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 SUZ12Q15022 739 aaKnown RBP7.23□□□□□ -1.25
SMC1A-201ENST00000322213 C6orf52Q5T4I8 152 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 FAM45BPQ6NSW5 357 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 SH3RF3Q8TEJ3 882 aaPredicted RBP7.23□□□□□ -1.25
SMC1A-201ENST00000322213 GPATCH1Q9BRR8 931 aaKnown RBP7.23□□□□□ -1.25
SMC1A-201ENST00000322213 LRRC19Q9H756 370 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 NINJ2Q9NZG7 142 aa7.23□□□□□ -1.25
SMC1A-201ENST00000322213 SPTBN1Q01082 2364 aaKnown RBP7.23□□□□□ -1.25
SMC1A-201ENST00000322213 ZC3H11AO75152 810 aaKnown RBP eCLIP7.22□□□□□ -1.25
SMC1A-201ENST00000322213 ZBTB11O95625 1053 aaPredicted RBP7.22□□□□□ -1.25
SMC1A-201ENST00000322213 SLC4A1P02730 911 aa7.22□□□□□ -1.25
SMC1A-201ENST00000322213 LINGO3P0C6S8 592 aa7.22□□□□□ -1.25
SMC1A-201ENST00000322213 COPZ1P61923 177 aa7.22□□□□□ -1.25
SMC1A-201ENST00000322213 CDC26Q8NHZ8 85 aa7.22□□□□□ -1.25
SMC1A-201ENST00000322213 UGT2B28Q9BY64 529 aa7.22□□□□□ -1.25
SMC1A-201ENST00000322213 SIK3Q9Y2K2 1263 aa7.22□□□□□ -1.25
SMC1A-201ENST00000322213 MST1RQ04912 1400 aa7.22□□□□□ -1.25
SMC1A-201ENST00000322213 M0QZ92 97 aa7.22□□□□□ -1.25
SMC1A-201ENST00000322213 FOXN3O00409 490 aaPredicted RBP7.22□□□□□ -1.25
SMC1A-201ENST00000322213 ABCB1P08183 1280 aaPredicted RBP7.22□□□□□ -1.25
SMC1A-201ENST00000322213 HOXB6P17509 224 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms