RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 CLDN5O00501 218 aa16.07■□□□□ 0.16
SHROOM1-201ENST00000319854 GABBR2O75899 941 aa16.07■□□□□ 0.16
SHROOM1-201ENST00000319854 MYL3P08590 195 aa16.07■□□□□ 0.16
SHROOM1-201ENST00000319854 CYP2B6P20813 491 aa16.07■□□□□ 0.16
SHROOM1-201ENST00000319854 ZRSR2Q15696 482 aaKnown RBP16.07■□□□□ 0.16
SHROOM1-201ENST00000319854 FAM187BQ17R55 369 aa16.07■□□□□ 0.16
SHROOM1-201ENST00000319854 SHCBP1Q8NEM2 672 aa16.07■□□□□ 0.16
SHROOM1-201ENST00000319854 ZNF398Q8TD17 642 aa16.07■□□□□ 0.16
SHROOM1-201ENST00000319854 PAFAH2Q99487 392 aa16.07■□□□□ 0.16
SHROOM1-201ENST00000319854 SNRNP25Q9BV90 132 aaKnown RBP16.07■□□□□ 0.16
SHROOM1-201ENST00000319854 TRIM55Q9BYV6 548 aa16.07■□□□□ 0.16
SHROOM1-201ENST00000319854 NMUR2Q9GZQ4 415 aa16.07■□□□□ 0.16
SHROOM1-201ENST00000319854 RSAD1Q9HA92 442 aa16.07■□□□□ 0.16
SHROOM1-201ENST00000319854 MRPL42Q9Y6G3 142 aaKnown RBP16.07■□□□□ 0.16
SHROOM1-201ENST00000319854 CITO14578 2027 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 B2RBV5 119 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 SPTLC1O15269 473 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 CDK7P50613 346 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 USP46P62068 366 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 CDK16Q00536 496 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 CDC16Q13042 620 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 LRRC36Q1X8D7 754 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 SOWAHAQ2M3V2 549 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 TREML1Q86YW5 311 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 PYROXD2Q8N2H3 581 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 NAT8LQ8N9F0 302 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 TTC13Q8NBP0 860 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 DTNBP1Q96EV8 351 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 TTC25Q96NG3 672 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 NFKBIZQ9BYH8 718 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 VCX3BQ9H321 246 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 VCX3AQ9NNX9 186 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 TBC1D30Q9Y2I9 924 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 DLDP09622 509 aaKnown RBP16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 DSG1Q02413 1049 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 CYP4V2Q6ZWL3 525 aaPredicted RBP16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 FAM131BQ86XD5 332 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 SLC2A14Q8TDB8 520 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 FNIP1Q8TF40 1166 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 ZC3H15Q8WU90 426 aaKnown RBP16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 ZFP42Q96MM3 310 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 HSFX1Q9UBD0 423 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 FARP1Q9Y4F1 1045 aaPredicted RBP16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 MAD1L1Q9Y6D9 718 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 A0A0G2JMZ2 1700 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 hCG_2014768A0A024R1R8 64 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 KBTBD13C9JR72 458 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 H3BRJ5 948 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 FCHO1O14526 889 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 CELF2O95319 508 aaKnown RBP16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 ZBED1O96006 694 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 GBE1Q04446 702 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 CFAP157Q5JU67 520 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 SLC27A1Q6PCB7 646 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 RIPOR1Q6ZS17 1223 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 RAPH1Q70E73 1250 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 TSSK1BQ9BXA7 367 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 RABGEF1Q9UJ41 708 aa16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 TIMM13Q9Y5L4 95 aaPredicted RBP16.06■□□□□ 0.16
SHROOM1-201ENST00000319854 FAM237BA0A1B0GVD1 139 aa16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 PDLIM1O00151 329 aa16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 ZSCAN9O15535 394 aaPredicted RBP16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 PLEKHH3Q7Z736 793 aa16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 CTU1Q7Z7A3 348 aaKnown RBP16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 PLD5Q8N7P1 536 aa16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 ATP11CQ8NB49 1132 aa16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 PCDH19Q8TAB3 1148 aa16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 ABHD16BQ9H3Z7 469 aa16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 MEIS3P2A8K0S8 358 aa16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 MYL2P10916 166 aa16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 GRM5P41594 1212 aa16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 GEMIN4P57678 1058 aaKnown RBP16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 HSF5Q4G112 596 aaPredicted RBP16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 OLFML1Q6UWY5 402 aa16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 MARK2Q7KZI7 788 aaKnown RBP16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 SDCCAG8Q86SQ7 713 aaPredicted RBP16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 ARHGAP18Q8N392 663 aa16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 RBM15BQ8NDT2 890 aaKnown RBP16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 BEST2Q8NFU1 509 aa16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 RNF157Q96PX1 679 aa16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 GBA2Q9HCG7 927 aaPredicted RBP16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 SENP1Q9P0U3 644 aa16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 PSMC3IPQ9P2W1 217 aaPredicted RBP16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 MAGED2Q9UNF1 606 aaPredicted RBP16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 IKBKGQ9Y6K9 419 aa16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 SLC4A7Q9Y6M7 1214 aa16.05■□□□□ 0.16
SHROOM1-201ENST00000319854 GLTPD2A6NH11 291 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 HNRNPRO43390 633 aaKnown RBP16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 ENO1P06733 434 aaKnown RBP16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 FAM163BP0C2L3 166 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 GNL1P36915 607 aaPredicted RBP16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 GTF2A2P52657 109 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 SOX4Q06945 474 aaPredicted RBP16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 INCA1Q0VD86 236 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 KBTBD12Q3ZCT8 623 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 OLFML2BQ68BL8 750 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 ADAM32Q8TC27 787 aa16.04■□□□□ 0.16
SHROOM1-201ENST00000319854 NMD3Q96D46 503 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms