RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 GRB10Q13322 594 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 KCNT1Q5JUK3 1230 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 ABRAXAS1Q6UWZ7 409 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 SLFN11Q7Z7L1 901 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 TMEM9Q9P0T7 183 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 VANGL2Q9ULK5 521 aa9.05□□□□□ -0.96
COL6A5-202ENST00000312481 CAND2O75155 1236 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 FESP07332 822 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 TPSB2P20231 275 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 SLC12A3P55017 1021 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 CREMQ03060 361 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 TPSAB1Q15661 275 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 UBE2SQ16763 222 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 LONRF1Q17RB8 773 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 PROSER1Q86XN7 944 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 CCNYL1Q8N7R7 359 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 SPATA5L1Q9BVQ7 753 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 PCIF1Q9H4Z3 704 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 KCNMB3Q9NPA1 279 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 GMEB1Q9Y692 573 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 ECE2O60344 883 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 CD58P19256 250 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 DUPD1Q68J44 220 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 PTTG2Q9NZH5 202 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 KANSL3Q9P2N6 904 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 ATXN10Q9UBB4 475 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 ADCY6O43306 1168 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 MYL3P08590 195 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 DGKDQ16760 1214 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 SNX30Q5VWJ9 437 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 LRRC34Q8IZ02 419 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 MAB21L3Q8N8X9 362 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 OR6P1Q8NGX9 317 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 KCNH7Q9NS40 1196 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 LMCD1Q9NZU5 365 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 LRFN2Q9ULH4 789 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.04□□□□□ -0.96
COL6A5-202ENST00000312481 PDZK1P1A8MUH7 402 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 TULP3O75386 442 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 ITGA10O75578 1167 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 RTN3O95197 1032 aaPredicted RBP9.04□□□□□ -0.96
COL6A5-202ENST00000312481 HMBSP08397 361 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 FAM98CQ17RN3 349 aaKnown RBP9.04□□□□□ -0.96
COL6A5-202ENST00000312481 ANGEL2Q5VTE6 544 aaKnown RBP9.04□□□□□ -0.96
COL6A5-202ENST00000312481 KHDRBS2Q5VWX1 349 aaKnown RBP9.04□□□□□ -0.96
COL6A5-202ENST00000312481 ANKRD23Q86SG2 305 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 MIER2Q8N344 545 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 RNF25Q96BH1 459 aaPredicted RBP9.04□□□□□ -0.96
COL6A5-202ENST00000312481 QRFPRQ96P65 431 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 KCTD5Q9NXV2 234 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 SPACA6W5XKT8 324 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 ALDH18A1P54886 795 aaKnown RBP9.04□□□□□ -0.96
COL6A5-202ENST00000312481 MPZL3Q6UWV2 235 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 NATD1Q8N6N6 113 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 ATL1Q8WXF7 558 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 BORCS5Q969J3 196 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 ROPN1LQ96C74 230 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 AGBL1Q96MI9 1066 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 CROTQ9UKG9 612 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 C2CD2Q9Y426 696 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 DAGLAQ9Y4D2 1042 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.04□□□□□ -0.96
COL6A5-202ENST00000312481 CYBBP04839 570 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 USP10Q14694 798 aaKnown RBP9.04□□□□□ -0.96
COL6A5-202ENST00000312481 PKN1Q16512 942 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 LPCAT2Q7L5N7 544 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 PID1Q7Z2X4 250 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 MAP4K3Q8IVH8 894 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 MPP5Q8N3R9 675 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 GRPEL2Q8TAA5 225 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 DPF2Q92785 391 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 NKD2Q969F2 451 aaPredicted RBP9.04□□□□□ -0.96
COL6A5-202ENST00000312481 SPATA33Q96N06 139 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 METTL5Q9NRN9 209 aaKnown RBP9.04□□□□□ -0.96
COL6A5-202ENST00000312481 KLHL3Q9UH77 587 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 SCN3AQ9NY46 2000 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 SPDYE16A6NNV3 312 aaPredicted RBP9.04□□□□□ -0.96
COL6A5-202ENST00000312481 TRIM66O15016 1216 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 UBOX5O94941 541 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 NPPAP01160 153 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 EIF2AK2P19525 551 aaKnown RBP9.04□□□□□ -0.96
COL6A5-202ENST00000312481 GRM3Q14832 879 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 SPDYE2Q495Y8 402 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 BICRALQ6AI39 1079 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 GADL1Q6ZQY3 521 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 BBS12Q6ZW61 710 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 LRRC4BQ9NT99 713 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 PIM2Q9P1W9 311 aa9.04□□□□□ -0.96
COL6A5-202ENST00000312481 ZNF646O15015 1829 aaPredicted RBP9.04□□□□□ -0.96
COL6A5-202ENST00000312481 RGSL1A5PLK6 1076 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 PNLIPRP1P54315 467 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 HLFQ16534 295 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 DDR2Q16832 855 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 RGS21Q2M5E4 152 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 SH3BP5LQ7L8J4 393 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 TBC1D21Q8IYX1 336 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 C7orf57Q8NEG2 295 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 RORBQ92753 470 aa9.03□□□□□ -0.96
COL6A5-202ENST00000312481 INPP4AQ96PE3 977 aaPredicted RBP9.03□□□□□ -0.96
COL6A5-202ENST00000312481 C1orf21Q9H246 121 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms