RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 LAMP5Q9UJQ1 280 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 MYO6Q9UM54 1294 aa8.62□□□□□ -1.03
CHD6-201ENST00000309279 PATJQ8NI35 1801 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 DENND4CQ5VZ89 1909 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 MUC3AQ02505 3323 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 F8VP50 259 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 CCL16O15467 120 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 CYP26A1O43174 497 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 MBTPS2O43462 519 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 XYLBO75191 536 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 SOAT2O75908 522 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 BEST1O76090 585 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 CD19P15391 556 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 NPR3P17342 541 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 XPAP23025 273 aaPredicted RBP8.61□□□□□ -1.03
CHD6-201ENST00000309279 GRIK1P39086 918 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 EPHB3P54753 998 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 EPHA5P54756 1037 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 BPIFB4P59827 614 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 PTK2Q05397 1052 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 SMAD4Q13485 552 aaKnown RBP8.61□□□□□ -1.03
CHD6-201ENST00000309279 DSG2Q14126 1118 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 RASA2Q15283 850 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 STILQ15468 1287 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 DDR2Q16832 855 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 ATAT1Q5SQI0 421 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 CCDC122Q5T0U0 273 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 RARS2Q5T160 578 aaKnown RBP8.61□□□□□ -1.03
CHD6-201ENST00000309279 HECTD3Q5T447 861 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 CLEC20AQ6ZU45 233 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 DNAJB7Q7Z6W7 309 aaPredicted RBP8.61□□□□□ -1.03
CHD6-201ENST00000309279 ITIH5Q86UX2 942 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 PASD1Q8IV76 773 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 AFAP1L2Q8N4X5 818 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 SMG7Q92540 1137 aaKnown RBP8.61□□□□□ -1.03
CHD6-201ENST00000309279 BAP1Q92560 729 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 IQCDQ96DY2 449 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 MYRFLQ96LU7 910 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 ZNF512Q96ME7 567 aaPredicted RBP8.61□□□□□ -1.03
CHD6-201ENST00000309279 NECTIN4Q96NY8 510 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 KCNK16Q96T55 309 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 SMOQ99835 787 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 LRRC3Q9BY71 257 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 WDR6Q9NNW5 1121 aaKnown RBP8.61□□□□□ -1.03
CHD6-201ENST00000309279 PNPLA8Q9NP80 782 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 DMAP1Q9NPF5 467 aaPredicted RBP8.61□□□□□ -1.03
CHD6-201ENST00000309279 ACP6Q9NPH0 428 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 THEGQ9P2T0 379 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 DNMT3BQ9UBC3 853 aaKnown RBP8.61□□□□□ -1.03
CHD6-201ENST00000309279 TSPAN16Q9UKR8 245 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 ATP8B3O60423 1300 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 DENND4AQ7Z401 1863 aa8.61□□□□□ -1.03
CHD6-201ENST00000309279 DOCK8Q8NF50 2099 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 A0A1W2PQJ5 194 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 CCDC66A2RUB6 948 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 F5H423 210 aaPredicted RBP8.6□□□□□ -1.03
CHD6-201ENST00000309279 CASQ2O14958 399 aaPredicted RBP8.6□□□□□ -1.03
CHD6-201ENST00000309279 NDUFB5O43674 189 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 PNMA6AP0CW24 399 aaPredicted RBP8.6□□□□□ -1.03
CHD6-201ENST00000309279 HMGA1P17096 107 aaKnown RBP8.6□□□□□ -1.03
CHD6-201ENST00000309279 PTPN2P17706 415 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 CD9P21926 228 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 ADORA2BP29275 332 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 SOX5P35711 763 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 USP8P40818 1118 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 STAT1P42224 750 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 MTHFRP42898 656 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 GPR15P49685 360 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 TFF2Q03403 129 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 IFRD2Q12894 506 aaPredicted RBP8.6□□□□□ -1.03
CHD6-201ENST00000309279 NR1H3Q13133 447 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 CBX2Q14781 532 aaPredicted RBP8.6□□□□□ -1.03
CHD6-201ENST00000309279 SMAD2Q15796 467 aaKnown RBP8.6□□□□□ -1.03
CHD6-201ENST00000309279 AAK1Q2M2I8 961 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 SPECC1LQ69YQ0 1117 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 DENND5BQ6ZUT9 1274 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 CACNA2D4Q7Z3S7 1137 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 SLC47A2Q86VL8 602 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 VSTM4Q8IW00 320 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 SCN4BQ8IWT1 228 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 ELMOD1Q8N336 334 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 CELF2-AS1Q8N7Q2 184 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 LEMD2Q8NC56 503 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 SUN5Q8TC36 379 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 SLC35F5Q8WV83 523 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 ZBTB9Q96C00 473 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 RIPOR3Q96MK2 946 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 NUDT16L1Q9BRJ7 211 aaKnown RBP8.6□□□□□ -1.03
CHD6-201ENST00000309279 YIPF4Q9BSR8 244 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 MED10Q9BTT4 135 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 APOL5Q9BWW9 433 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 KRT82Q9NSB4 513 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 KLHL11Q9NVR0 708 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 IL37Q9NZH6 218 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 SEPT10Q9P0V9 454 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 NFKBIL1Q9UBC1 381 aaPredicted RBP8.6□□□□□ -1.03
CHD6-201ENST00000309279 PCDHGC3Q9UN70 934 aa8.6□□□□□ -1.03
CHD6-201ENST00000309279 USP15Q9Y4E8 981 aaPredicted RBP8.6□□□□□ -1.03
CHD6-201ENST00000309279 FAM92AA1XBS5 289 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 SLC38A8A6NNN8 435 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms