RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 SQORQ9Y6N5 450 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 USP24Q9UPU5 2620 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 COL4A3Q01955 1670 aa5.21□□□□□ -1.57
CKS1B-201ENST00000308987 RALGAPA1Q6GYQ0 2036 aa5.21□□□□□ -1.57
CKS1B-201ENST00000308987 ARID2Q68CP9 1835 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 IGKV6D-21A0A0A0MT36 114 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 MACROD2A1Z1Q3 448 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 MYMKA6NI61 221 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 TBKBP1A7MCY6 615 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 PP2D1A8MPX8 630 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 HMGB1P1B2RPK0 211 aaPredicted RBP5.21□□□□□ -1.58
CKS1B-201ENST00000308987 C2CD4DB7Z1M9 353 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 PROB1E7EW31 1015 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 CCNT1O60563 726 aaKnown RBP5.21□□□□□ -1.58
CKS1B-201ENST00000308987 SRGAP2O75044 1071 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 FGF18O76093 207 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 GFPT2O94808 682 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 WEE2P0C1S8 567 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 MYBL2P10244 700 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 FGFR1P11362 822 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 NME1P15531 152 aaKnown RBP5.21□□□□□ -1.58
CKS1B-201ENST00000308987 ATF7P17544 494 aaPredicted RBP5.21□□□□□ -1.58
CKS1B-201ENST00000308987 CCNFP41002 786 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 ACTR2P61160 394 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 TNNC1P63316 161 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 FAM189BP81408 668 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 TAGLNQ01995 201 aaKnown RBP5.21□□□□□ -1.58
CKS1B-201ENST00000308987 DRP2Q13474 957 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 CUL1Q13616 776 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 NAB2Q15742 525 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 CALCRLQ16602 461 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 LETM2Q2VYF4 491 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 EDRF1Q3B7T1 1238 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 ZCWPW2Q504Y3 356 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 SPDYCQ5MJ68 293 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 RTP2Q5QGT7 225 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 KLHDC7AQ5VTJ3 777 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 SFMBT2Q5VUG0 894 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 PLPP4Q5VZY2 271 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 KRT79Q5XKE5 535 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 FBXW10Q5XX13 1052 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 ICE2Q659A1 982 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 ANKRD54Q6NXT1 300 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 C8orf74Q6P047 294 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 XRRA1Q6P2D8 792 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 MTHFD1LQ6UB35 978 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 KDM7AQ6ZMT4 941 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 MICALCLQ6ZW33 695 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 TADA2BQ86TJ2 420 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 RSPH3Q86UC2 560 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 FAM228AQ86W67 206 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 FMNL3Q8IVF7 1028 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 TRIM59Q8IWR1 403 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 IQCKQ8N0W5 287 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 RASGRP4Q8TDF6 673 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 ADAMTS17Q8TE56 1095 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 TBCKQ8TEA7 893 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 LRRC15Q8TF66 581 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 GLG1Q92896 1179 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 KISS1RQ969F8 398 aaPredicted RBP5.21□□□□□ -1.58
CKS1B-201ENST00000308987 CDK5RAP3Q96JB5 506 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 PBKQ96KB5 322 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 CAPZA3Q96KX2 299 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 DHRS1Q96LJ7 313 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 CASD1Q96PB1 797 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 ADAM2Q99965 735 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 LRRC1Q9BTT6 524 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 SMARCAD1Q9H4L7 1026 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 POMKQ9H5K3 350 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 MMRN2Q9H8L6 949 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 PLCB1Q9NQ66 1216 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 RGS18Q9NS28 235 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 KCNH7Q9NS40 1196 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 BLOC1S4Q9NUP1 217 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 FBXL5Q9UKA1 691 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 INTUQ9ULD6 942 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 ST3GAL5Q9UNP4 418 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 COL4A3BPQ9Y5P4 624 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 F5P12259 2224 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 SDK1Q7Z5N4 2213 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 CACNA1GO43497 2377 aa5.21□□□□□ -1.58
CKS1B-201ENST00000308987 PATJQ8NI35 1801 aa5.2□□□□□ -1.58
CKS1B-201ENST00000308987 A0A0A6YYK5 440 aaPredicted RBP5.2□□□□□ -1.58
CKS1B-201ENST00000308987 SMIM35A0A1B0GVV1 85 aa5.2□□□□□ -1.58
CKS1B-201ENST00000308987 PRR23AA6NEV1 266 aa5.2□□□□□ -1.58
CKS1B-201ENST00000308987 RRN3P2A6NIE6 340 aa5.2□□□□□ -1.58
CKS1B-201ENST00000308987 LRRC53A6NM62 1247 aa5.2□□□□□ -1.58
CKS1B-201ENST00000308987 H0Y8X5 98 aa5.2□□□□□ -1.58
CKS1B-201ENST00000308987 CCDC188H7C350 402 aa5.2□□□□□ -1.58
CKS1B-201ENST00000308987 ZNF185O15231 689 aa5.2□□□□□ -1.58
CKS1B-201ENST00000308987 EDIL3O43854 480 aa5.2□□□□□ -1.58
CKS1B-201ENST00000308987 B4GALT3O60512 393 aa5.2□□□□□ -1.58
CKS1B-201ENST00000308987 GPR32O75388 356 aa5.2□□□□□ -1.58
CKS1B-201ENST00000308987 ATE1O95260 518 aa5.2□□□□□ -1.58
CKS1B-201ENST00000308987 MOCS3O95396 460 aa5.2□□□□□ -1.58
CKS1B-201ENST00000308987 C22orf31O95567 290 aa5.2□□□□□ -1.58
CKS1B-201ENST00000308987 VTNP04004 478 aa5.2□□□□□ -1.58
CKS1B-201ENST00000308987 TP53P04637 393 aaPredicted RBP5.2□□□□□ -1.58
CKS1B-201ENST00000308987 CD3EP07766 207 aa5.2□□□□□ -1.58
CKS1B-201ENST00000308987 MYBP10242 640 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms