RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 TTC30AQ86WT1 665 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 RNF148Q8N7C7 305 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 AGAP3Q96P47 875 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 FDXACB1Q9BRP7 624 aaPredicted RBP17.11■□□□□ 0.33
SSH3-201ENST00000308127 FRMD8P1Q9BZ68 369 aaPredicted RBP17.11■□□□□ 0.33
SSH3-201ENST00000308127 PTPRHQ9HD43 1115 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 PPME1Q9Y570 386 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 AK5Q9Y6K8 562 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 ACKR2O00590 384 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 DCXO43602 365 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 SIN3BO75182 1162 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 GABBR2O75899 941 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 FGF3P11487 239 aaPredicted RBP17.11■□□□□ 0.33
SSH3-201ENST00000308127 LCP1P13796 627 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 CCR10P46092 362 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 DLG1Q12959 904 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 PPP2R5DQ14738 602 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 TRMT5Q32P41 509 aaKnown RBP17.11■□□□□ 0.33
SSH3-201ENST00000308127 C11orf91Q3C1V1 193 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 FAM47CQ5HY64 1035 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 GLRA4Q5JXX5 417 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 MAP7D3Q8IWC1 876 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 DEFB107AQ8IZN7 70 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 MRPL45Q9BRJ2 306 aaKnown RBP17.11■□□□□ 0.33
SSH3-201ENST00000308127 NRDE2Q9H7Z3 1164 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 SOX13Q9UN79 622 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 MRPL42Q9Y6G3 142 aaKnown RBP17.11■□□□□ 0.33
SSH3-201ENST00000308127 SPAG6O75602 509 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 GSTT1P30711 240 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 TUBB3Q13509 450 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 DLG2Q15700 870 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 MBLAC2Q68D91 279 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 TSHZ1Q6ZSZ6 1077 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 GALNT15Q8N3T1 639 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 CCDC185Q8N715 623 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 AS3MTQ9HBK9 375 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 XPNPEP3Q9NQH7 507 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 TMEM216Q9P0N5 145 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 ADAMTS5Q9UNA0 930 aa17.11■□□□□ 0.33
SSH3-201ENST00000308127 APOBEC2Q9Y235 224 aaKnown RBP17.11■□□□□ 0.33
SSH3-201ENST00000308127 BRCA2P51587 3418 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 MYOCOSA0A1B0GUC4 107 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 GOLGA8TH3BQL2 631 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 NEMP1O14524 444 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 DGKIO75912 1065 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 OR6B1O95007 311 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 SERPINA6P08185 405 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 SPATA31D3P0C874 917 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 VAV1P15498 845 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 GOT1P17174 413 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 RXRBP28702 533 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 RBBP5Q15291 538 aaKnown RBP17.1■□□□□ 0.33
SSH3-201ENST00000308127 TRIP10Q15642 601 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 SLC10A6Q3KNW5 377 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 EFHC1Q5JVL4 640 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 SPATA31D4Q6ZUB0 917 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 FAM131BQ86XD5 332 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 PIWIL2Q8TC59 973 aaKnown RBP17.1■□□□□ 0.33
SSH3-201ENST00000308127 UNKQ9C0B0 810 aaKnown RBP17.1■□□□□ 0.33
SSH3-201ENST00000308127 DPEP3Q9H4B8 488 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 CAB39LQ9H9S4 337 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 PDGFCQ9NRA1 345 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 THAP1Q9NVV9 213 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 SNX9Q9Y5X1 595 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 FAM159BA6NKW6 160 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 PAPSS1O43252 624 aaPredicted RBP17.1■□□□□ 0.33
SSH3-201ENST00000308127 BUD23O43709 281 aaKnown RBP17.1■□□□□ 0.33
SSH3-201ENST00000308127 PDGFRBP09619 1106 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 SAT1P21673 171 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 ADORA2BP29275 332 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 CRHR1P34998 444 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 CCNFP41002 786 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 RABGGTBP53611 331 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 ROR2Q01974 943 aaKnown RBP17.1■□□□□ 0.33
SSH3-201ENST00000308127 MBTD1Q05BQ5 628 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 CCNIQ14094 377 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 FRMD7Q6ZUT3 714 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 WDR75Q8IWA0 830 aaKnown RBP17.1■□□□□ 0.33
SSH3-201ENST00000308127 SPATA33Q96N06 139 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 IFT122Q9HBG6 1241 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 PNPLA8Q9NP80 782 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 CPSF2Q9P2I0 782 aaKnown RBP17.1■□□□□ 0.33
SSH3-201ENST00000308127 PCDHGB4Q9UN71 923 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 NME7Q9Y5B8 376 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 PCDHGB5Q9Y5G0 923 aa17.1■□□□□ 0.33
SSH3-201ENST00000308127 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.09■□□□□ 0.33
SSH3-201ENST00000308127 PGM3O95394 542 aa17.09■□□□□ 0.33
SSH3-201ENST00000308127 GRAMD1BQ3KR37 738 aa17.09■□□□□ 0.33
SSH3-201ENST00000308127 KHSRPQ92945 711 aaKnown RBP eCLIP17.09■□□□□ 0.33
SSH3-201ENST00000308127 S100A14Q9HCY8 104 aa17.09■□□□□ 0.33
SSH3-201ENST00000308127 RLFQ13129 1914 aa17.09■□□□□ 0.33
SSH3-201ENST00000308127 A6NJR5 290 aa17.09■□□□□ 0.33
SSH3-201ENST00000308127 VDRP11473 427 aa17.09■□□□□ 0.33
SSH3-201ENST00000308127 TSHRP16473 764 aa17.09■□□□□ 0.33
SSH3-201ENST00000308127 PROZP22891 400 aa17.09■□□□□ 0.33
SSH3-201ENST00000308127 ICAM3P32942 547 aa17.09■□□□□ 0.33
SSH3-201ENST00000308127 GRIA2P42262 883 aa17.09■□□□□ 0.33
SSH3-201ENST00000308127 PITX1P78337 314 aaPredicted RBP17.09■□□□□ 0.33
SSH3-201ENST00000308127 TMEM62Q0P6H9 643 aa17.09■□□□□ 0.33
SSH3-201ENST00000308127 MXD4Q14582 209 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms