RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 BMP6P22004 513 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 HNRNPH1P31943 449 aaKnown RBP16.34■□□□□ 0.21
USP42-201ENST00000306177 ZNF135P52742 658 aaPredicted RBP16.34■□□□□ 0.21
USP42-201ENST00000306177 CCDC153Q494R4 210 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 FAM171A1Q5VUB5 890 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 LRRC55Q6ZSA7 311 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 AENQ8WTP8 325 aaKnown RBP16.34■□□□□ 0.21
USP42-201ENST00000306177 ASTN1O14525 1302 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 RNASEH1O60930 286 aaKnown RBP16.34■□□□□ 0.21
USP42-201ENST00000306177 UBTFL6P0CB48 400 aaPredicted RBP16.34■□□□□ 0.21
USP42-201ENST00000306177 GLRA2P23416 452 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 YWHAQP27348 245 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 NUMBP49757 651 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 DEFB128Q7Z7B8 93 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 KCNMB4Q86W47 210 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 PURBQ96QR8 312 aaKnown RBP16.34■□□□□ 0.21
USP42-201ENST00000306177 TMEM51Q9NW97 253 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 F8W810 466 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 RRP1BQ14684 758 aaKnown RBP16.34■□□□□ 0.21
USP42-201ENST00000306177 TFAP2DQ7Z6R9 452 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 LPCAT1Q8NF37 534 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 INPP5DQ92835 1189 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 SFMBT1Q9UHJ3 866 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 KANSL1LA0AUZ9 987 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 E9PBE3 544 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 RNF103O00237 685 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 TPST1O60507 370 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 KLHL41O60662 606 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 RECQL4O94761 1208 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 RTN3O95197 1032 aaPredicted RBP16.34■□□□□ 0.21
USP42-201ENST00000306177 OR1E1P30953 314 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 ZNF844Q08AG5 666 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 CAMK2GQ13555 558 aaPredicted RBP16.34■□□□□ 0.21
USP42-201ENST00000306177 TJAP1Q5JTD0 557 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 N4BP2L1Q5TBK1 243 aaPredicted RBP16.34■□□□□ 0.21
USP42-201ENST00000306177 PDPK2PQ6A1A2 396 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 TATDN1Q6P1N9 297 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 IL31RAQ8NI17 732 aa16.34■□□□□ 0.21
USP42-201ENST00000306177 MRPL9Q9BYD2 267 aaKnown RBP16.34■□□□□ 0.21
USP42-201ENST00000306177 CCDC130P13994 396 aa16.33■□□□□ 0.21
USP42-201ENST00000306177 MGAT1P26572 445 aa16.33■□□□□ 0.21
USP42-201ENST00000306177 CNTN1Q12860 1018 aa16.33■□□□□ 0.21
USP42-201ENST00000306177 TMC7Q7Z402 723 aa16.33■□□□□ 0.21
USP42-201ENST00000306177 TMCO5AQ8N6Q1 288 aa16.33■□□□□ 0.21
USP42-201ENST00000306177 APOPT1Q96IL0 206 aa16.33■□□□□ 0.21
USP42-201ENST00000306177 RXFP1Q9HBX9 757 aa16.33■□□□□ 0.21
USP42-201ENST00000306177 CTNNAL1Q9UBT7 734 aa16.33■□□□□ 0.21
USP42-201ENST00000306177 DPP7Q9UHL4 492 aa16.33■□□□□ 0.21
USP42-201ENST00000306177 ANKRD26Q9UPS8 1709 aa16.33■□□□□ 0.21
USP42-201ENST00000306177 FAM153BP0C7A2 387 aa16.33■□□□□ 0.21
USP42-201ENST00000306177 TPH1P17752 444 aa16.33■□□□□ 0.21
USP42-201ENST00000306177 NCALDP61601 193 aa16.33■□□□□ 0.21
USP42-201ENST00000306177 NFYCQ13952 458 aa16.33■□□□□ 0.21
USP42-201ENST00000306177 FAM153CQ494X1 144 aa16.33■□□□□ 0.21
USP42-201ENST00000306177 MIIPQ5JXC2 388 aa16.33■□□□□ 0.21
USP42-201ENST00000306177 UNC93AQ86WB7 457 aa16.33■□□□□ 0.21
USP42-201ENST00000306177 CPNE1Q99829 537 aa16.33■□□□□ 0.21
USP42-201ENST00000306177 PRDM16Q9HAZ2 1276 aa16.33■□□□□ 0.21
USP42-201ENST00000306177 FAM153AQ9UHL3 310 aa16.33■□□□□ 0.21
USP42-201ENST00000306177 TNFSF13BQ9Y275 285 aa16.33■□□□□ 0.21
USP42-201ENST00000306177 ATP11BQ9Y2G3 1177 aa16.33■□□□□ 0.21
USP42-201ENST00000306177 SSTR1P30872 391 aa16.33■□□□□ 0.2
USP42-201ENST00000306177 S100A5P33763 92 aa16.33■□□□□ 0.2
USP42-201ENST00000306177 PEX5P50542 639 aa16.33■□□□□ 0.2
USP42-201ENST00000306177 SPDYCQ5MJ68 293 aa16.33■□□□□ 0.2
USP42-201ENST00000306177 OTOAQ7RTW8 1153 aa16.33■□□□□ 0.2
USP42-201ENST00000306177 TMEM161BQ8NDZ6 487 aa16.33■□□□□ 0.2
USP42-201ENST00000306177 SRPK1Q96SB4 655 aaKnown RBP16.33■□□□□ 0.2
USP42-201ENST00000306177 VAT1Q99536 393 aa16.33■□□□□ 0.2
USP42-201ENST00000306177 ADRB2P07550 413 aa16.33■□□□□ 0.2
USP42-201ENST00000306177 VCLP18206 1134 aa16.33■□□□□ 0.2
USP42-201ENST00000306177 DNAJB2P25686 324 aa16.33■□□□□ 0.2
USP42-201ENST00000306177 FUT2Q10981 343 aa16.33■□□□□ 0.2
USP42-201ENST00000306177 KCNT2Q6UVM3 1135 aa16.33■□□□□ 0.2
USP42-201ENST00000306177 COPS5Q92905 334 aa16.33■□□□□ 0.2
USP42-201ENST00000306177 FHDC1Q9C0D6 1143 aaPredicted RBP16.33■□□□□ 0.2
USP42-201ENST00000306177 ATP13A1Q9HD20 1204 aa16.33■□□□□ 0.2
USP42-201ENST00000306177 F8VP50 259 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 GJB6O95452 261 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 SERPINE1P05121 402 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 YBX3P16989 372 aaKnown RBP eCLIP16.32■□□□□ 0.26e-9■□□□□ 9.5
USP42-201ENST00000306177 PTPN4P29074 926 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 NEK2P51955 445 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 PLD1Q13393 1074 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 SLC9A9Q8IVB4 645 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 ADAM32Q8TC27 787 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 KAT5Q92993 513 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 KCND1Q9NSA2 647 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 DYRK1BQ9Y463 629 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 NRCAMQ92823 1304 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 MLNP12872 115 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 EPB42P16452 691 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 ITGB5P18084 799 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 ANXA11P50995 505 aaKnown RBP16.32■□□□□ 0.2
USP42-201ENST00000306177 PLIN5Q00G26 463 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 TTC33Q6PID6 262 aaPredicted RBP16.32■□□□□ 0.2
USP42-201ENST00000306177 ETNPPLQ8TBG4 499 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 TCP10LQ8TDR4 215 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 CIPCQ9C0C6 399 aa16.32■□□□□ 0.2
USP42-201ENST00000306177 CHST7Q9NS84 486 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms