RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 CLRN2A0PK11 232 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 GOLGA8RI6L899 631 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 MDM4O15151 490 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 METTL18O95568 372 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 UBTFL6P0CB48 400 aaPredicted RBP5.63□□□□□ -1.51
VPS50-202ENST00000305866 ETS2P15036 469 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 UBA1P22314 1058 aaKnown RBP5.63□□□□□ -1.51
VPS50-202ENST00000305866 PRDX6P30041 224 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 GPD2P43304 727 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 MYL6P60660 151 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 PHEXP78562 749 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 PTK2BQ14289 1009 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 STXBP2Q15833 593 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 TSTD2Q5T7W7 516 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 LMBRD2Q68DH5 695 aaPredicted RBP5.63□□□□□ -1.51
VPS50-202ENST00000305866 ZDHHC17Q8IUH5 632 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 UNC5BQ8IZJ1 945 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 FAM110BQ8TC76 370 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 DTX3LQ8TDB6 740 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 FAM213AQ9BRX8 229 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 TUBB6Q9BUF5 446 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 STN1Q9H668 368 aaKnown RBP5.63□□□□□ -1.51
VPS50-202ENST00000305866 MRM3Q9HC36 420 aaKnown RBP5.63□□□□□ -1.51
VPS50-202ENST00000305866 EIF2B3Q9NR50 452 aaKnown RBP5.63□□□□□ -1.51
VPS50-202ENST00000305866 DNAAF2Q9NVR5 837 aaKnown RBP5.63□□□□□ -1.51
VPS50-202ENST00000305866 PTTG2Q9NZH5 202 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 SLC17A6Q9P2U8 582 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 NEU3Q9UQ49 428 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 NEUROG3Q9Y4Z2 214 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 MYO16Q9Y6X6 1858 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 C2CD4BA6NLJ0 364 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 POC1B-GALNT4F8VUJ3 575 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 AMHP03971 560 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 KRT7P08729 469 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 SETSIPP0DME0 302 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 MCF2P10911 925 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 VAV1P15498 845 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 EIF2AK2P19525 551 aaKnown RBP5.63□□□□□ -1.51
VPS50-202ENST00000305866 DNAJB1P25685 340 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 GRIA1P42261 906 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 ARFIP2P53365 341 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 TXNL4AP83876 142 aaKnown RBP5.63□□□□□ -1.51
VPS50-202ENST00000305866 MMRN1Q13201 1228 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 PDE1CQ14123 709 aaPredicted RBP5.63□□□□□ -1.51
VPS50-202ENST00000305866 CBX2Q14781 532 aaPredicted RBP5.63□□□□□ -1.51
VPS50-202ENST00000305866 AP1ARQ63HQ0 302 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 SWSAP1Q6NVH7 229 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 MPZL3Q6UWV2 235 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 Q6ZNX1 250 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 ATP11CQ8NB49 1132 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 NT5C3BQ969T7 300 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 ZNF512Q96ME7 567 aaPredicted RBP5.63□□□□□ -1.51
VPS50-202ENST00000305866 MCEEQ96PE7 176 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 SLC4A5Q9BY07 1137 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 MRPL4Q9BYD3 311 aaKnown RBP5.63□□□□□ -1.51
VPS50-202ENST00000305866 SLC13A1Q9BZW2 595 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 ASB7Q9H672 318 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 ALG13Q9NP73 1137 aaKnown RBP5.63□□□□□ -1.51
VPS50-202ENST00000305866 OLAHQ9NV23 265 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 PSAT1Q9Y617 370 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 USP34Q70CQ2 3546 aa5.63□□□□□ -1.51
VPS50-202ENST00000305866 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 TRIM24O15164 1050 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 AXIN1O15169 862 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 SMIM24O75264 130 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 FKBP6O75344 327 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 LYPLA1O75608 230 aaPredicted RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 CDH2P19022 906 aaPredicted RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 TPSB2P20231 275 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 TGM2P21980 687 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 HOXC8P31273 242 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 ZFP36L2P47974 494 aaKnown RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 ZNF143P52747 638 aaPredicted RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 MXRA7P84157 204 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 PTK7Q13308 1070 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 NAB1Q13506 487 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 STILQ15468 1287 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 TPSAB1Q15661 275 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 ANKRD20A4Q4UJ75 823 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 CELF3Q5SZQ8 465 aaKnown RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 ARHGAP17Q68EM7 881 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 LCLAT1Q6UWP7 414 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 CENPUQ71F23 418 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 TMEM110Q86TL2 294 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 PALM2Q8IXS6 379 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 TMEM35BQ8NCS4 154 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 ACVR1CQ8NER5 493 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 ZNF597Q96LX8 424 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 GPR78Q96P69 363 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 FNBP1Q96RU3 617 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 TBCBQ99426 244 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 BTBD2Q9BX70 525 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 GBA2Q9HCG7 927 aaPredicted RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 ZNF277Q9NRM2 450 aaPredicted RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 RCOR3Q9P2K3 495 aaPredicted RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 HEMK1Q9Y5R4 338 aaPredicted RBP5.62□□□□□ -1.51
VPS50-202ENST00000305866 PLXNB3Q9ULL4 1909 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 KANSL1LA0AUZ9 987 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 MEI4A8MW99 385 aa5.62□□□□□ -1.51
VPS50-202ENST00000305866 TMX2-CTNND1H3BSU7 103 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms