RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 AOC1P19801 751 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 CNTFP26441 200 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 ARL1P40616 181 aaPredicted RBP13.4□□□□□ -0.26
TRIM35-201ENST00000305364 MLH1P40692 756 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 ABCG1P45844 678 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 SNX16P57768 344 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 TLR1Q15399 786 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 CYP2R1Q6VVX0 501 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 SETD3Q86TU7 594 aaPredicted RBP13.4□□□□□ -0.26
TRIM35-201ENST00000305364 RXFP2Q8WXD0 754 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 MARK4Q96L34 752 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 LENG8Q96PV6 779 aaPredicted RBP13.4□□□□□ -0.26
TRIM35-201ENST00000305364 KLHL8Q9P2G9 620 aaPredicted RBP13.4□□□□□ -0.26
TRIM35-201ENST00000305364 FARP1Q9Y4F1 1045 aaPredicted RBP13.4□□□□□ -0.26
TRIM35-201ENST00000305364 SPATA31D3P0C874 917 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 ETV4P43268 484 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 GABRB2P47870 512 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 GLRBP48167 497 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 STX1BP61266 288 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 SURF1Q15526 300 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 SPATA31D4Q6ZUB0 917 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 FRMD7Q6ZUT3 714 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 PID1Q7Z2X4 250 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 PBXIP1Q96AQ6 731 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 RCN3Q96D15 328 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 NLRP4Q96MN2 994 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 HAPLN3Q96S86 360 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 MRPL46Q9H2W6 279 aaKnown RBP13.4□□□□□ -0.26
TRIM35-201ENST00000305364 WDR41Q9HAD4 459 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 PLGRKTQ9HBL7 147 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 SLC38A10Q9HBR0 1119 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 PFDN4Q9NQP4 134 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 MAGEB3O15480 346 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 OCM2P0CE71 109 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 OCMP0CE72 109 aaPredicted RBP13.4□□□□□ -0.26
TRIM35-201ENST00000305364 EIF4BP23588 611 aaKnown RBP13.4□□□□□ -0.26
TRIM35-201ENST00000305364 SPRP35270 261 aaPredicted RBP13.4□□□□□ -0.26
TRIM35-201ENST00000305364 SOX11P35716 441 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 BAATQ14032 418 aaPredicted RBP13.4□□□□□ -0.26
TRIM35-201ENST00000305364 PTF1AQ7RTS3 328 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 CROCCP3Q8IVE0 287 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 MCUQ8NE86 351 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 ACTRT2Q8TDY3 377 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 ZNF669Q96BR6 464 aaPredicted RBP13.4□□□□□ -0.26
TRIM35-201ENST00000305364 WDR55Q9H6Y2 383 aaPredicted RBP13.4□□□□□ -0.26
TRIM35-201ENST00000305364 COG4Q9H9E3 785 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 MRPL40Q9NQ50 206 aaKnown RBP13.4□□□□□ -0.26
TRIM35-201ENST00000305364 ACSS2Q9NR19 701 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 RAB26Q9ULW5 256 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 TMX2Q9Y320 296 aa13.4□□□□□ -0.26
TRIM35-201ENST00000305364 SLIT2O94813 1529 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 GLI3P10071 1580 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 SDR42E2A6NKP2 422 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 IDH3AP50213 366 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 AP3M2P53677 418 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 MAPK10P53779 464 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 CDH8P55286 799 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 CCNIQ14094 377 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 GPR162Q16538 588 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 C15orf59Q2T9L4 293 aaPredicted RBP13.39□□□□□ -0.27
TRIM35-201ENST00000305364 XKR3Q5GH77 459 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 ZFP28Q8NHY6 868 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 IFT43Q96FT9 208 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 CEP41Q9BYV8 373 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 VPS33BQ9H267 617 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 ST6GALNAC4Q9H4F1 302 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 RPF1Q9H9Y2 349 aaKnown RBP13.39□□□□□ -0.27
TRIM35-201ENST00000305364 XPNPEP3Q9NQH7 507 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 BFARQ9NZS9 450 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 LRP5O75197 1615 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 POLBP06746 335 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 ITGAXP20702 1163 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 EPHA3P29320 983 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 TEDDM1Q5T9Z0 273 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 PCDH20Q8N6Y1 951 aaKnown RBP13.39□□□□□ -0.27
TRIM35-201ENST00000305364 ALS2Q96Q42 1657 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 SLC4A5Q9BY07 1137 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 ROBO1Q9Y6N7 1651 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 A0A0J9YVX5 310 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 KDM1AO60341 852 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 C4BPAP04003 597 aaKnown RBP13.39□□□□□ -0.27
TRIM35-201ENST00000305364 NR3C2P08235 984 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 SULF1Q8IWU6 871 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 PHTF2Q8N3S3 785 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 EBNA1BP2Q99848 306 aaKnown RBP13.39□□□□□ -0.27
TRIM35-201ENST00000305364 STN1Q9H668 368 aaKnown RBP13.39□□□□□ -0.27
TRIM35-201ENST00000305364 RNF146Q9NTX7 359 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 SLC39A10Q9ULF5 831 aa13.39□□□□□ -0.27
TRIM35-201ENST00000305364 SAC3D1A6NKF1 404 aa13.38□□□□□ -0.27
TRIM35-201ENST00000305364 XPOTO43592 962 aaKnown RBP13.38□□□□□ -0.27
TRIM35-201ENST00000305364 CSDE1O75534 798 aaKnown RBP13.38□□□□□ -0.27
TRIM35-201ENST00000305364 ASNSP08243 561 aa13.38□□□□□ -0.27
TRIM35-201ENST00000305364 IL1R2P27930 398 aa13.38□□□□□ -0.27
TRIM35-201ENST00000305364 HMOX2P30519 316 aa13.38□□□□□ -0.27
TRIM35-201ENST00000305364 MYLK3Q32MK0 819 aa13.38□□□□□ -0.27
TRIM35-201ENST00000305364 PTPN20Q4JDL3 420 aa13.38□□□□□ -0.27
TRIM35-201ENST00000305364 BOLA3Q53S33 107 aa13.38□□□□□ -0.27
TRIM35-201ENST00000305364 ADGRG6Q86SQ4 1221 aa13.38□□□□□ -0.27
TRIM35-201ENST00000305364 ADCY4Q8NFM4 1077 aa13.38□□□□□ -0.27
TRIM35-201ENST00000305364 CCDC138Q96M89 665 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms