RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 NPY2RP49146 381 aa16.78■□□□□ 0.28
BRD3-201ENST00000303407 ATP13A4Q4VNC1 1196 aa16.78■□□□□ 0.28
BRD3-201ENST00000303407 HORMAD1Q86X24 394 aa16.78■□□□□ 0.28
BRD3-201ENST00000303407 POPDC2Q9HBU9 364 aa16.78■□□□□ 0.28
BRD3-201ENST00000303407 RECQL4O94761 1208 aa16.78■□□□□ 0.28
BRD3-201ENST00000303407 ZBTB17Q13105 803 aa16.78■□□□□ 0.28
BRD3-201ENST00000303407 TTLL9Q3SXZ7 439 aa16.78■□□□□ 0.28
BRD3-201ENST00000303407 NCKIPSDQ9NZQ3 722 aa16.78■□□□□ 0.28
BRD3-201ENST00000303407 TRHDEQ9UKU6 1024 aa16.78■□□□□ 0.28
BRD3-201ENST00000303407 USP17L7P0C7H9 530 aa16.78■□□□□ 0.28
BRD3-201ENST00000303407 CENPTQ96BT3 561 aa16.78■□□□□ 0.28
BRD3-201ENST00000303407 MFSD14AQ96MC6 490 aa16.78■□□□□ 0.28
BRD3-201ENST00000303407 DACH2Q96NX9 599 aa16.78■□□□□ 0.28
BRD3-201ENST00000303407 ECSITQ9BQ95 431 aa16.78■□□□□ 0.28
BRD3-201ENST00000303407 SUFUQ9UMX1 484 aa16.78■□□□□ 0.28
BRD3-201ENST00000303407 MEI4A8MW99 385 aa16.78■□□□□ 0.28
BRD3-201ENST00000303407 ENDOD1O94919 500 aa16.78■□□□□ 0.28
BRD3-201ENST00000303407 ITGA9Q13797 1035 aa16.78■□□□□ 0.28
BRD3-201ENST00000303407 ARHGAP15Q53QZ3 475 aa16.78■□□□□ 0.28
BRD3-201ENST00000303407 DUPD1Q68J44 220 aa16.78■□□□□ 0.28
BRD3-201ENST00000303407 TFAP2DQ7Z6R9 452 aa16.78■□□□□ 0.28
BRD3-201ENST00000303407 TBC1D19Q8N5T2 526 aa16.78■□□□□ 0.28
BRD3-201ENST00000303407 BTBD10Q9BSF8 475 aa16.78■□□□□ 0.28
BRD3-201ENST00000303407 LOC102724159A0A0B4J2E5 919 aa16.77■□□□□ 0.28
BRD3-201ENST00000303407 TRDMT1O14717 391 aaKnown RBP16.77■□□□□ 0.28
BRD3-201ENST00000303407 CHADO15335 359 aa16.77■□□□□ 0.28
BRD3-201ENST00000303407 HOXA2O43364 376 aa16.77■□□□□ 0.28
BRD3-201ENST00000303407 TUBP50607 506 aa16.77■□□□□ 0.28
BRD3-201ENST00000303407 ZNF143P52747 638 aaPredicted RBP16.77■□□□□ 0.28
BRD3-201ENST00000303407 PPIL2Q13356 520 aa16.77■□□□□ 0.28
BRD3-201ENST00000303407 PWP2Q15269 919 aaKnown RBP16.77■□□□□ 0.28
BRD3-201ENST00000303407 WLSQ5T9L3 541 aa16.77■□□□□ 0.28
BRD3-201ENST00000303407 LRRC38Q5VT99 294 aa16.77■□□□□ 0.28
BRD3-201ENST00000303407 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.77■□□□□ 0.28
BRD3-201ENST00000303407 RRM2BQ7LG56 351 aa16.77■□□□□ 0.28
BRD3-201ENST00000303407 OR5B17Q8NGF7 314 aa16.77■□□□□ 0.28
BRD3-201ENST00000303407 THAP1Q9NVV9 213 aa16.77■□□□□ 0.28
BRD3-201ENST00000303407 ENO4A6NNW6 628 aa16.77■□□□□ 0.28
BRD3-201ENST00000303407 TBX4P57082 545 aa16.77■□□□□ 0.28
BRD3-201ENST00000303407 DMC1Q14565 340 aa16.77■□□□□ 0.28
BRD3-201ENST00000303407 MTFR1Q15390 333 aa16.77■□□□□ 0.28
BRD3-201ENST00000303407 CACHD1Q5VU97 1274 aa16.77■□□□□ 0.28
BRD3-201ENST00000303407 NR5A2O00482 541 aa16.77■□□□□ 0.28
BRD3-201ENST00000303407 FCHO1O14526 889 aa16.77■□□□□ 0.28
BRD3-201ENST00000303407 ADRA1DP25100 572 aa16.77■□□□□ 0.28
BRD3-201ENST00000303407 CD151P48509 253 aa16.77■□□□□ 0.28
BRD3-201ENST00000303407 NOMO3P69849 1222 aa16.77■□□□□ 0.28
BRD3-201ENST00000303407 AUHQ13825 339 aaKnown RBP16.77■□□□□ 0.28
BRD3-201ENST00000303407 CNGA2Q16280 664 aa16.77■□□□□ 0.28
BRD3-201ENST00000303407 CATSPER2Q96P56 530 aa16.77■□□□□ 0.28
BRD3-201ENST00000303407 FAM32AQ9Y421 112 aaKnown RBP16.77■□□□□ 0.28
BRD3-201ENST00000303407 YBX3P16989 372 aaKnown RBP eCLIP16.77■□□□□ 0.27
BRD3-201ENST00000303407 KCTD19Q17RG1 926 aaPredicted RBP16.77■□□□□ 0.27
BRD3-201ENST00000303407 MARC1Q5VT66 337 aa16.77■□□□□ 0.27
BRD3-201ENST00000303407 MAP1SQ66K74 1059 aaPredicted RBP16.77■□□□□ 0.27
BRD3-201ENST00000303407 SLC22A9Q8IVM8 553 aa16.77■□□□□ 0.27
BRD3-201ENST00000303407 THAP11Q96EK4 314 aa16.77■□□□□ 0.27
BRD3-201ENST00000303407 TMEM169Q96HH4 297 aa16.77■□□□□ 0.27
BRD3-201ENST00000303407 DMAP1Q9NPF5 467 aaPredicted RBP16.77■□□□□ 0.27
BRD3-201ENST00000303407 TRPM5Q9NZQ8 1165 aa16.77■□□□□ 0.27
BRD3-201ENST00000303407 ASTN2O75129 1339 aaPredicted RBP16.77■□□□□ 0.27
BRD3-201ENST00000303407 MZF1P28698 734 aaPredicted RBP16.76■□□□□ 0.27
BRD3-201ENST00000303407 TBL3Q12788 808 aaKnown RBP16.76■□□□□ 0.27
BRD3-201ENST00000303407 NMRK2Q9NPI5 230 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 PCDHB5Q9Y5E4 795 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 TRPV2Q9Y5S1 764 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 KCNK1O00180 336 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 CBX4O00257 560 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 LRRC74AQ0VAA2 488 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 IQSEC1Q6DN90 963 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 MYO1HQ8N1T3 1032 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 UBXN6Q9BZV1 441 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 ANKRD6Q9Y2G4 727 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 KPNA1P52294 538 aaPredicted RBP16.76■□□□□ 0.27
BRD3-201ENST00000303407 PLIN5Q00G26 463 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 NAB1Q13506 487 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 SLC45A4Q5BKX6 768 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 HERC6Q8IVU3 1022 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 TKTL2Q9H0I9 626 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 CDT1Q9H211 546 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 VPS28Q9UK41 221 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 BANF1O75531 89 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 BFSP2Q13515 415 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 PDP2Q9P2J9 529 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 BLOC1S6Q9UL45 172 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 MRPL42Q9Y6G3 142 aaKnown RBP16.76■□□□□ 0.27
BRD3-201ENST00000303407 OPLAHO14841 1288 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 TPST1O60507 370 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 RHOAP61586 193 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 KPNB1Q14974 876 aaKnown RBP16.76■□□□□ 0.27
BRD3-201ENST00000303407 NFE2Q16621 373 aaPredicted RBP16.76■□□□□ 0.27
BRD3-201ENST00000303407 WASHC2DQ5SRD0 308 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 PLPPR4Q7Z2D5 763 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 KIAA0319LQ8IZA0 1049 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 TEKT4Q8WW24 435 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 THUMPD3Q9BV44 507 aaKnown RBP16.76■□□□□ 0.27
BRD3-201ENST00000303407 FBXO44Q9H4M3 255 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 XPNPEP3Q9NQH7 507 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 PCDHA11Q9Y5I1 949 aa16.76■□□□□ 0.27
BRD3-201ENST00000303407 SOAT1P35610 550 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms