RNA–Protein interactions for RNA: ENST00000302946.12

SLFNL1-201, Transcript of schlafen like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLFNL1, Length 1,951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLFNL1-201ENST00000302946 PRKAG3Q9UGI9 489 aa17.02■□□□□ 0.32
SLFNL1-201ENST00000302946 GRID1Q9ULK0 1009 aa17.02■□□□□ 0.32
SLFNL1-201ENST00000302946 AP4E1Q9UPM8 1137 aa17.02■□□□□ 0.32
SLFNL1-201ENST00000302946 TDRD15B5MCY1 1934 aaKnown RBP17.02■□□□□ 0.31
SLFNL1-201ENST00000302946 TIMP1P01033 207 aa17.02■□□□□ 0.31
SLFNL1-201ENST00000302946 RPA3P35244 121 aaPredicted RBP17.02■□□□□ 0.31
SLFNL1-201ENST00000302946 GBE1Q04446 702 aa17.02■□□□□ 0.31
SLFNL1-201ENST00000302946 SLC10A2Q12908 348 aaPredicted RBP17.02■□□□□ 0.31
SLFNL1-201ENST00000302946 SYCP2LQ5T4T6 812 aa17.02■□□□□ 0.31
SLFNL1-201ENST00000302946 WSCD1Q658N2 575 aa17.02■□□□□ 0.31
SLFNL1-201ENST00000302946 STRADAQ7RTN6 431 aa17.02■□□□□ 0.31
SLFNL1-201ENST00000302946 SPATA21Q7Z572 469 aa17.02■□□□□ 0.31
SLFNL1-201ENST00000302946 PIGZQ86VD9 579 aa17.02■□□□□ 0.31
SLFNL1-201ENST00000302946 COLGALT2Q8IYK4 626 aa17.02■□□□□ 0.31
SLFNL1-201ENST00000302946 LRRN4Q8WUT4 740 aa17.02■□□□□ 0.31
SLFNL1-201ENST00000302946 HNRNPABQ99729 332 aaKnown RBP17.02■□□□□ 0.31
SLFNL1-201ENST00000302946 ETNK2Q9NVF9 386 aa17.02■□□□□ 0.31
SLFNL1-201ENST00000302946 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.02■□□□□ 0.31
SLFNL1-201ENST00000302946 SLC12A4Q9UP95 1085 aa17.02■□□□□ 0.31
SLFNL1-201ENST00000302946 USP3Q9Y6I4 520 aa17.02■□□□□ 0.31
SLFNL1-201ENST00000302946 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.01■□□□□ 0.31
SLFNL1-201ENST00000302946 H0YHG0 523 aa17.01■□□□□ 0.31
SLFNL1-201ENST00000302946 M0QZQ0 153 aa17.01■□□□□ 0.31
SLFNL1-201ENST00000302946 EFCAB14O75071 495 aa17.01■□□□□ 0.31
SLFNL1-201ENST00000302946 ATP2C2O75185 946 aa17.01■□□□□ 0.31
SLFNL1-201ENST00000302946 CYP11A1P05108 521 aa17.01■□□□□ 0.31
SLFNL1-201ENST00000302946 IGFBP6P24592 240 aaPredicted RBP17.01■□□□□ 0.31
SLFNL1-201ENST00000302946 PCSK1P29120 753 aa17.01■□□□□ 0.31
SLFNL1-201ENST00000302946 YWHAZP63104 245 aaKnown RBP17.01■□□□□ 0.31
SLFNL1-201ENST00000302946 SPARCL1Q14515 664 aa17.01■□□□□ 0.31
SLFNL1-201ENST00000302946 TIGD5Q53EQ6 642 aa17.01■□□□□ 0.31
SLFNL1-201ENST00000302946 OTUD1Q5VV17 481 aaPredicted RBP17.01■□□□□ 0.31
SLFNL1-201ENST00000302946 RGS9BPQ6ZS82 235 aa17.01■□□□□ 0.31
SLFNL1-201ENST00000302946 PAQR9Q6ZVX9 377 aa17.01■□□□□ 0.31
SLFNL1-201ENST00000302946 CDKL3Q8IVW4 592 aaPredicted RBP17.01■□□□□ 0.31
SLFNL1-201ENST00000302946 SUSD3Q96L08 255 aa17.01■□□□□ 0.31
SLFNL1-201ENST00000302946 CSPG4P5Q96PW8 444 aa17.01■□□□□ 0.31
SLFNL1-201ENST00000302946 PAAF1Q9BRP4 392 aa17.01■□□□□ 0.31
SLFNL1-201ENST00000302946 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.01■□□□□ 0.31
SLFNL1-201ENST00000302946 CACNG4Q9UBN1 327 aa17.01■□□□□ 0.31
SLFNL1-201ENST00000302946 TSC2P49815 1807 aa17.01■□□□□ 0.31
SLFNL1-201ENST00000302946 TCRBV9S1A1TA0A576 114 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 AVILO75366 819 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 SUN1O94901 812 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 GSTA1P08263 222 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 TYMPP19971 482 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 MATKP42679 507 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 ADIGQ0VDE8 80 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 XRCC4Q13426 336 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 SLC1A5Q15758 541 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 SLC45A4Q5BKX6 768 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 FAXCQ5TGI0 409 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 CRIPAKQ8N1N5 446 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 CCDC110Q8TBZ0 833 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 CASD1Q96PB1 797 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 DUSP16Q9BY84 665 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 MCOLN1Q9GZU1 580 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 DDX43Q9NXZ2 648 aaKnown RBP17■□□□□ 0.31
SLFNL1-201ENST00000302946 ABHD14A-ACY1A0A1B0GW23 586 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 CLDN5O00501 218 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 DAB1O75553 588 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 DNAJC8O75937 253 aaPredicted RBP17■□□□□ 0.31
SLFNL1-201ENST00000302946 BEST1O76090 585 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 C1QAP02745 245 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 RAG1P15918 1043 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 ATP2A2P16615 1042 aaKnown RBP17■□□□□ 0.31
SLFNL1-201ENST00000302946 ZFXP17010 805 aaPredicted RBP17■□□□□ 0.31
SLFNL1-201ENST00000302946 KRT4P19013 534 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 CA4P22748 312 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 ACAT1P24752 427 aaKnown RBP17■□□□□ 0.31
SLFNL1-201ENST00000302946 MSH2P43246 934 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 EFHC1Q5JVL4 640 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 NCBP2-AS2Q69YL0 99 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 BNIPLQ7Z465 357 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 CAND1Q86VP6 1230 aaKnown RBP17■□□□□ 0.31
SLFNL1-201ENST00000302946 DEFB106AQ8N104 65 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 TMEM199Q8N511 208 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 NDRG1Q92597 394 aaKnown RBP17■□□□□ 0.31
SLFNL1-201ENST00000302946 QKIQ96PU8 341 aaKnown RBP eCLIP17■□□□□ 0.31
SLFNL1-201ENST00000302946 CYTH2Q99418 400 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 PAIP2Q9BPZ3 127 aaKnown RBP17■□□□□ 0.31
SLFNL1-201ENST00000302946 FRMD8Q9BZ67 464 aaPredicted RBP17■□□□□ 0.31
SLFNL1-201ENST00000302946 KLC2Q9H0B6 622 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 PRDM5Q9NQX1 630 aaPredicted RBP17■□□□□ 0.31
SLFNL1-201ENST00000302946 CDH9Q9ULB4 789 aa17■□□□□ 0.31
SLFNL1-201ENST00000302946 SPAG6O75602 509 aa16.99■□□□□ 0.31
SLFNL1-201ENST00000302946 RASSF9O75901 435 aa16.99■□□□□ 0.31
SLFNL1-201ENST00000302946 DDHD2O94830 711 aa16.99■□□□□ 0.31
SLFNL1-201ENST00000302946 NPR3P17342 541 aa16.99■□□□□ 0.31
SLFNL1-201ENST00000302946 NR2C2P49116 596 aa16.99■□□□□ 0.31
SLFNL1-201ENST00000302946 SLC8A3P57103 927 aa16.99■□□□□ 0.31
SLFNL1-201ENST00000302946 PDK4Q16654 411 aa16.99■□□□□ 0.31
SLFNL1-201ENST00000302946 TCTN1Q2MV58 587 aa16.99■□□□□ 0.31
SLFNL1-201ENST00000302946 SLC25A52Q3SY17 297 aa16.99■□□□□ 0.31
SLFNL1-201ENST00000302946 KIAA0319Q5VV43 1072 aa16.99■□□□□ 0.31
SLFNL1-201ENST00000302946 ZNF280BQ86YH2 543 aa16.99■□□□□ 0.31
SLFNL1-201ENST00000302946 SPOCK2Q92563 424 aa16.99■□□□□ 0.31
SLFNL1-201ENST00000302946 TMEM175Q9BSA9 504 aa16.99■□□□□ 0.31
SLFNL1-201ENST00000302946 PLAC1Q9HBJ0 212 aa16.99■□□□□ 0.31
SLFNL1-201ENST00000302946 ETNK1Q9HBU6 452 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms