RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 EPAS1Q99814 870 aa16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 CRISPLD1Q9H336 500 aa16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 TLR8Q9NR97 1041 aaKnown RBP16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 CLIC5Q9NZA1 410 aa16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 GMIPQ9P107 970 aa16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 HSFX1Q9UBD0 423 aa16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 BCLAF3A2AJT9 711 aaKnown RBP16.26■□□□□ 0.19
HERPUD1-201ENST00000300302 URODP06132 367 aa16.26■□□□□ 0.19
HERPUD1-201ENST00000300302 RARGP13631 454 aa16.26■□□□□ 0.19
HERPUD1-201ENST00000300302 SYN1P17600 705 aa16.26■□□□□ 0.19
HERPUD1-201ENST00000300302 RPL17P18621 184 aaKnown RBP16.26■□□□□ 0.19
HERPUD1-201ENST00000300302 TPI1P60174 286 aa16.26■□□□□ 0.19
HERPUD1-201ENST00000300302 CBX1P83916 185 aa16.26■□□□□ 0.19
HERPUD1-201ENST00000300302 GBE1Q04446 702 aa16.26■□□□□ 0.19
HERPUD1-201ENST00000300302 SEMA3BQ13214 749 aa16.26■□□□□ 0.19
HERPUD1-201ENST00000300302 DPYSQ14117 519 aa16.26■□□□□ 0.19
HERPUD1-201ENST00000300302 MORF4L2Q15014 288 aa16.26■□□□□ 0.19
HERPUD1-201ENST00000300302 TPGS2Q68CL5 300 aa16.26■□□□□ 0.19
HERPUD1-201ENST00000300302 MSANTD2Q6P1R3 559 aa16.26■□□□□ 0.19
HERPUD1-201ENST00000300302 PDZD4Q76G19 769 aaPredicted RBP16.26■□□□□ 0.19
HERPUD1-201ENST00000300302 STKLD1Q8NE28 680 aa16.26■□□□□ 0.19
HERPUD1-201ENST00000300302 C10orf88Q9H8K7 445 aa16.26■□□□□ 0.19
HERPUD1-201ENST00000300302 OLA1Q9NTK5 396 aaKnown RBP16.26■□□□□ 0.19
HERPUD1-201ENST00000300302 ARHGEF38Q9NXL2 777 aa16.26■□□□□ 0.19
HERPUD1-201ENST00000300302 OR12D3Q9UGF7 316 aa16.26■□□□□ 0.19
HERPUD1-201ENST00000300302 AFF4Q9UHB7 1163 aaKnown RBP16.26■□□□□ 0.19
HERPUD1-201ENST00000300302 SFMBT1Q9UHJ3 866 aa16.26■□□□□ 0.19
HERPUD1-201ENST00000300302 PCDHB12Q9Y5F1 795 aa16.26■□□□□ 0.19
HERPUD1-201ENST00000300302 AGPSO00116 658 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 ADAM12O43184 909 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 OAS2P29728 719 aaKnown RBP16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 PPP2R5DQ14738 602 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 LRIG3Q6UXM1 1119 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 C16orf59Q7L2K0 433 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 CCDC25Q86WR0 208 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 ZNF461Q8TAF7 563 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 CASP10Q92851 521 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 HAPLN3Q96S86 360 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 CLSTN3Q9BQT9 956 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 OSBPL2Q9H1P3 480 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 ADAM7Q9H2U9 754 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 PABPC3Q9H361 631 aaKnown RBP16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 ANLNQ9NQW6 1124 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 PLAAQ9Y263 795 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 HACD1B0YJ81 288 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 SMAPO00193 183 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 KCNN4O15554 427 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 ZNF189O75820 626 aaPredicted RBP16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 SLC2A3P11169 496 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 RPL22P35268 128 aaKnown RBP16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 PGFP49763 221 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 TAF10Q12962 218 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 PAFAH1B3Q15102 231 aaKnown RBP16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 UAP1Q16222 522 aaPredicted RBP16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 SLC45A4Q5BKX6 768 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 C4orf22Q6V702 233 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 RTP4Q96DX8 246 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 FERMT1Q9BQL6 677 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 OSER1Q9NX31 292 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 DTLQ9NZJ0 730 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 SHOC2Q9UQ13 582 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 TLR6Q9Y2C9 796 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 RAD54BQ9Y620 910 aa16.25■□□□□ 0.19
HERPUD1-201ENST00000300302 SLC38A8A6NNN8 435 aa16.24■□□□□ 0.19
HERPUD1-201ENST00000300302 FAM72CH0Y354 149 aa16.24■□□□□ 0.19
HERPUD1-201ENST00000300302 H3BQF6 201 aa16.24■□□□□ 0.19
HERPUD1-201ENST00000300302 I6L893 689 aaPredicted RBP16.24■□□□□ 0.19
HERPUD1-201ENST00000300302 ABLIM3O94929 683 aa16.24■□□□□ 0.19
HERPUD1-201ENST00000300302 GJB5O95377 273 aa16.24■□□□□ 0.19
HERPUD1-201ENST00000300302 HTR7P34969 479 aa16.24■□□□□ 0.19
HERPUD1-201ENST00000300302 SLC10A2Q12908 348 aaPredicted RBP16.24■□□□□ 0.19
HERPUD1-201ENST00000300302 COL13A1Q5TAT6 717 aaPredicted RBP16.24■□□□□ 0.19
HERPUD1-201ENST00000300302 FAM72AQ5TYM5 149 aa16.24■□□□□ 0.19
HERPUD1-201ENST00000300302 FAM72DQ6L9T8 149 aa16.24■□□□□ 0.19
HERPUD1-201ENST00000300302 TRMT10CQ7L0Y3 403 aaKnown RBP16.24■□□□□ 0.19
HERPUD1-201ENST00000300302 FAM72BQ86X60 149 aa16.24■□□□□ 0.19
HERPUD1-201ENST00000300302 FIBCD1Q8N539 461 aa16.24■□□□□ 0.19
HERPUD1-201ENST00000300302 ZCCHC9Q8N567 271 aaKnown RBP16.24■□□□□ 0.19
HERPUD1-201ENST00000300302 TFB1MQ8WVM0 346 aaKnown RBP16.24■□□□□ 0.19
HERPUD1-201ENST00000300302 PKNOX2Q96KN3 472 aa16.24■□□□□ 0.19
HERPUD1-201ENST00000300302 ZBED2Q9BTP6 218 aa16.24■□□□□ 0.19
HERPUD1-201ENST00000300302 USP29Q9HBJ7 922 aa16.24■□□□□ 0.19
HERPUD1-201ENST00000300302 MRPL17Q9NRX2 175 aaKnown RBP16.24■□□□□ 0.19
HERPUD1-201ENST00000300302 ETNK2Q9NVF9 386 aa16.24■□□□□ 0.19
HERPUD1-201ENST00000300302 PAK5Q9P286 719 aa16.24■□□□□ 0.19
HERPUD1-201ENST00000300302 MSI1O43347 362 aaKnown RBP16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 MAP3K6O95382 1288 aa16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 SYF2O95926 243 aaKnown RBP16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 ATF6P18850 670 aa16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 RBL1P28749 1068 aa16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 HTRA4P83105 476 aaPredicted RBP16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 CREMQ03060 361 aa16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 PDK1Q15118 436 aa16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 RNASEH2BQ5TBB1 312 aaKnown RBP16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 DENND2CQ68D51 928 aa16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 PSRC1Q6PGN9 363 aaPredicted RBP16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 HOOK3Q86VS8 718 aa16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 PPIL6Q8IXY8 311 aa16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 GPR65Q8IYL9 337 aa16.23■□□□□ 0.19
HERPUD1-201ENST00000300302 VPS52Q8N1B4 723 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms