RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 C16orf89Q6UX73 402 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 CMC1Q7Z7K0 106 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 ADGRG6Q86SQ4 1221 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 KIAA0319LQ8IZA0 1049 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 ADGRF2Q8IZF7 708 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 TSPAN14Q8NG11 270 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 RXFP2Q8WXD0 754 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 CNKSR2Q8WXI2 1034 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 PDCD2LQ9BRP1 358 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 ZNF518BQ9C0D4 1074 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 COG4Q9H9E3 785 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 JPH1Q9HDC5 661 aaPredicted RBP11.74□□□□□ -0.53
TRUB1-201ENST00000298746 PCDHGB4Q9UN71 923 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 DOLKQ9UPQ8 538 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 PCDHGB5Q9Y5G0 923 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 HEMK1Q9Y5R4 338 aaPredicted RBP11.74□□□□□ -0.53
TRUB1-201ENST00000298746 SNX13Q9Y5W8 968 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 SLC15A5A6NIM6 579 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 VILLO15195 856 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 DNAJA2O60884 412 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 NR3C2P08235 984 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 GRK2P25098 689 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 ABCE1P61221 599 aaKnown RBP11.74□□□□□ -0.53
TRUB1-201ENST00000298746 ITPRIPL1Q6GPH6 555 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 NCAPG2Q86XI2 1143 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 TFB1MQ8WVM0 346 aaKnown RBP11.74□□□□□ -0.53
TRUB1-201ENST00000298746 LZICQ8WZA0 190 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 THAP11Q96EK4 314 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 POPDC2Q9HBU9 364 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 RRN3Q9NYV6 651 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 UBAP1Q9NZ09 502 aa11.74□□□□□ -0.53
TRUB1-201ENST00000298746 C6orf203Q9P0P8 240 aaPredicted RBP11.74□□□□□ -0.53
TRUB1-201ENST00000298746 TRUB2O95900 331 aaKnown RBP11.73□□□□□ -0.53
TRUB1-201ENST00000298746 THRAP10827 490 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 EPHA3P29320 983 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 GABRB2P47870 512 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 KCNJ11Q14654 390 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 LPIN1Q14693 890 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 NOMO1Q15155 1222 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 TEX44Q53QW1 395 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 STRIP1Q5VSL9 837 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 FAM91A1Q658Y4 838 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 CCDC60Q8IWA6 550 aaPredicted RBP11.73□□□□□ -0.53
TRUB1-201ENST00000298746 CCNYL1Q8N7R7 359 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 CERKQ8TCT0 537 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 RCN3Q96D15 328 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 ANKRD36BP1Q96IX9 119 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 AGAP3Q96P47 875 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 EBNA1BP2Q99848 306 aaKnown RBP11.73□□□□□ -0.53
TRUB1-201ENST00000298746 TMEM79Q9BSE2 394 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 ZDHHC7Q9NXF8 308 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 NHSQ6T4R5 1651 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 INO80B-WBP1J3KQ70 363 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 GIPC1O14908 333 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 ATP9BO43861 1147 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 AMHP03971 560 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 CDK4P11802 303 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 PCSK6P29122 969 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 CBX3Q13185 183 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 PPM1LQ5SGD2 360 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 LAYNQ6UX15 382 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 C15orf39Q6ZRI6 1047 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 ZNF554Q86TJ5 538 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 DNAAF3Q8N9W5 541 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 WRNIP1Q96S55 665 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 INO80BQ9C086 356 aaPredicted RBP11.73□□□□□ -0.53
TRUB1-201ENST00000298746 TMEM39BQ9GZU3 492 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 XPNPEP3Q9NQH7 507 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 DCDC2Q9UHG0 476 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 ZNF180Q9UJW8 692 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 EFR3BQ9Y2G0 817 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 RPS6KL1Q9Y6S9 549 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 STX16-NPEPL1H3BU86 382 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 ATP5BP06576 529 aaKnown RBP11.73□□□□□ -0.53
TRUB1-201ENST00000298746 XRCC1P18887 633 aaPredicted RBP11.73□□□□□ -0.53
TRUB1-201ENST00000298746 GPD1P21695 349 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 CCND2P30279 289 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 MLH1P40692 756 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 CCR3P51677 355 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 THOP1P52888 689 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 TAS1R3Q7RTX0 852 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 CLVS1Q8IUQ0 354 aaPredicted RBP11.73□□□□□ -0.53
TRUB1-201ENST00000298746 WDTC1Q8N5D0 677 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 TDRD5Q8NAT2 981 aaKnown RBP11.73□□□□□ -0.53
TRUB1-201ENST00000298746 MOCOSQ96EN8 888 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 FERMT1Q9BQL6 677 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 PAIP1Q9H074 479 aaKnown RBP11.73□□□□□ -0.53
TRUB1-201ENST00000298746 TMEM216Q9P0N5 145 aa11.73□□□□□ -0.53
TRUB1-201ENST00000298746 RSL24D1Q9UHA3 163 aaKnown RBP11.73□□□□□ -0.53
TRUB1-201ENST00000298746 SF3B1O75533 1304 aaKnown RBP eCLIP11.72□□□□□ -0.533e-6■■■■■ 137.9
TRUB1-201ENST00000298746 PLIN3O60664 434 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 ENTPD3O75355 529 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 ZNF189O75820 626 aaPredicted RBP11.72□□□□□ -0.53
TRUB1-201ENST00000298746 ASS1P00966 412 aaKnown RBP11.72□□□□□ -0.53
TRUB1-201ENST00000298746 ERVK-10P10266 1014 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 CAP2P40123 477 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 GTF2A2P52657 109 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 ACTR2P61160 394 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 RAB6CQ53S08 254 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 RBM12BQ8IXT5 1001 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms