RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 MYBPC2Q14324 1141 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 LONRF1Q17RB8 773 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 EFCAB12Q6NXP0 572 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 GALNTL5Q7Z4T8 443 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 LRRC6Q86X45 466 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 GLT1D1Q96MS3 346 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 TMEM51Q9NW97 253 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 MAGEB3O15480 346 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 RASA1P20936 1047 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 SHQ1Q6PI26 577 aaKnown RBP12.36□□□□□ -0.43
PCF11-201ENST00000298281 C16orf86Q6ZW13 317 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 GPR141Q7Z602 305 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 CACUL1Q86Y37 369 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 KLHL23Q8NBE8 558 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 C1QTNF7Q9BXJ2 289 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 C8orf4Q9NR00 106 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 SLCO1B7G3V0H7 640 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 PMPCBO75439 489 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 CKMP06732 381 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 MBL2P11226 248 aaPredicted RBP12.36□□□□□ -0.43
PCF11-201ENST00000298281 AMD1P17707 334 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 CNTFP26441 200 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 NR1I3Q14994 352 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 SNRNP27Q8WVK2 155 aaKnown RBP12.36□□□□□ -0.43
PCF11-201ENST00000298281 COL26A1Q96A83 441 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 NUDT12Q9BQG2 462 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 ISCUQ9H1K1 167 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 WDCPQ9H6R7 721 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 RAD54BQ9Y620 910 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 AFF2P51816 1311 aa12.36□□□□□ -0.43
PCF11-201ENST00000298281 BTN3A3O00478 584 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 FGD3Q5JSP0 725 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 DNAJC9Q8WXX5 260 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 APBB2Q92870 758 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 TRNT1Q96Q11 434 aaKnown RBP12.35□□□□□ -0.43
PCF11-201ENST00000298281 MNTQ99583 582 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 FAM49BQ9NUQ9 324 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 DPP7Q9UHL4 492 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 TMEM120BA0PK00 339 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 GMFGO60234 142 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 ULK1O75385 1050 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 SERPINA3P01011 423 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 DENND1BQ6P3S1 775 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 C4orf33Q8N1A6 199 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 PRR36Q9H6K5 1346 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 PRDM15P57071 1507 aaPredicted RBP12.35□□□□□ -0.43
PCF11-201ENST00000298281 GLRA3O75311 464 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 PDK2Q15119 407 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 GOLGA7BQ2TAP0 167 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 MLPHQ9BV36 600 aaPredicted RBP12.35□□□□□ -0.43
PCF11-201ENST00000298281 ABCG4Q9H172 646 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 TNKS2Q9H2K2 1166 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 HMG20AQ9NP66 347 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 GTF3C4Q9UKN8 822 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 EFR3BQ9Y2G0 817 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 CROCC2H7BZ55 1655 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 ANKRD65E5RJM6 399 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 COMTP21964 271 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 EPHB2P29323 1055 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 ITGA9Q13797 1035 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 SETD6Q8TBK2 473 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 TBC1D16Q8TBP0 767 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 MPP4Q96JB8 637 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 SHCBP1LQ9BZQ2 653 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 SPON1Q9HCB6 807 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 HACL1Q9UJ83 578 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 DRG1Q9Y295 367 aaKnown RBP12.35□□□□□ -0.43
PCF11-201ENST00000298281 ALG6Q9Y672 507 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 TET3O43151 1660 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 IFNGR2P38484 337 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 HALP42357 657 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 MMP14P50281 582 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 NFIXQ14938 502 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 PLEKHA7Q6IQ23 1121 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 CHP1Q99653 195 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 NRDE2Q9H7Z3 1164 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 DSEQ9UL01 958 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 DAGLAQ9Y4D2 1042 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 MAFKO60675 156 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 PRG2P13727 222 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 TGM2P21980 687 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 KPNB1Q14974 876 aaKnown RBP12.35□□□□□ -0.43
PCF11-201ENST00000298281 RABL6Q3YEC7 729 aaPredicted RBP12.35□□□□□ -0.43
PCF11-201ENST00000298281 SLC20A1Q8WUM9 679 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 NRKQ7Z2Y5 1582 aa12.35□□□□□ -0.43
PCF11-201ENST00000298281 ACADSP16219 412 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 GTF2H1P32780 548 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 COPZ1P61923 177 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 PURAQ00577 322 aaKnown RBP12.34□□□□□ -0.43
PCF11-201ENST00000298281 DSG1Q02413 1049 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 MTAPQ13126 283 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 ACOX1Q15067 660 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 ULK2Q8IYT8 1036 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 PDLIM2Q96JY6 352 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 WDR24Q96S15 920 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 SPATA9Q9BWV2 254 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 C1QTNF1Q9BXJ1 281 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 TEX46H3BTG2 121 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 TRIM38O00635 465 aa12.34□□□□□ -0.43
PCF11-201ENST00000298281 OR10H2O60403 315 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms