RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 SEMA4DQ92854 862 aa16.73■□□□□ 0.27
TMEM41A-201ENST00000296254 PLD4Q96BZ4 506 aa16.73■□□□□ 0.27
TMEM41A-201ENST00000296254 TMEM176AQ96HP8 235 aa16.73■□□□□ 0.27
TMEM41A-201ENST00000296254 HEXIM2Q96MH2 286 aaKnown RBP16.73■□□□□ 0.27
TMEM41A-201ENST00000296254 ARID3AQ99856 593 aa16.73■□□□□ 0.27
TMEM41A-201ENST00000296254 SLC2A11Q9BYW1 496 aa16.73■□□□□ 0.27
TMEM41A-201ENST00000296254 UBXN6Q9BZV1 441 aa16.73■□□□□ 0.27
TMEM41A-201ENST00000296254 IL21RQ9HBE5 538 aa16.73■□□□□ 0.27
TMEM41A-201ENST00000296254 CISHQ9NSE2 258 aa16.73■□□□□ 0.27
TMEM41A-201ENST00000296254 MAPK8IP1Q9UQF2 711 aa16.73■□□□□ 0.27
TMEM41A-201ENST00000296254 FNDC3AQ9Y2H6 1198 aaKnown RBP16.73■□□□□ 0.27
TMEM41A-201ENST00000296254 MUC22E2RYF6 1773 aaPredicted RBP16.73■□□□□ 0.27
TMEM41A-201ENST00000296254 FASNP49327 2511 aaKnown RBP16.72■□□□□ 0.27
TMEM41A-201ENST00000296254 SLC12A8A0AV02 714 aa16.72■□□□□ 0.27
TMEM41A-201ENST00000296254 METTL12A8MUP2 240 aa16.72■□□□□ 0.27
TMEM41A-201ENST00000296254 BCAT2O15382 392 aaPredicted RBP16.72■□□□□ 0.27
TMEM41A-201ENST00000296254 EPHX1P07099 455 aa16.72■□□□□ 0.27
TMEM41A-201ENST00000296254 ACADMP11310 421 aa16.72■□□□□ 0.27
TMEM41A-201ENST00000296254 HOXD9P28356 352 aaPredicted RBP16.72■□□□□ 0.27
TMEM41A-201ENST00000296254 RAD23BP54727 409 aa16.72■□□□□ 0.27
TMEM41A-201ENST00000296254 MCCD1P59942 119 aaPredicted RBP16.72■□□□□ 0.27
TMEM41A-201ENST00000296254 BNC1Q01954 994 aa16.72■□□□□ 0.27
TMEM41A-201ENST00000296254 SCAPQ12770 1279 aa16.72■□□□□ 0.27
TMEM41A-201ENST00000296254 DPYDQ12882 1025 aa16.72■□□□□ 0.27
TMEM41A-201ENST00000296254 IL27RAQ6UWB1 636 aa16.72■□□□□ 0.27
TMEM41A-201ENST00000296254 BHLHA9Q7RTU4 235 aa16.72■□□□□ 0.27
TMEM41A-201ENST00000296254 SPRYD3Q8NCJ5 442 aa16.72■□□□□ 0.27
TMEM41A-201ENST00000296254 C1orf216Q8TAB5 229 aa16.72■□□□□ 0.27
TMEM41A-201ENST00000296254 DDI1Q8WTU0 396 aa16.72■□□□□ 0.27
TMEM41A-201ENST00000296254 CCDC47Q96A33 483 aaKnown RBP16.72■□□□□ 0.27
TMEM41A-201ENST00000296254 NUP58Q9BVL2 599 aa16.72■□□□□ 0.27
TMEM41A-201ENST00000296254 PCED1AQ9H1Q7 454 aa16.72■□□□□ 0.27
TMEM41A-201ENST00000296254 APOBEC2Q9Y235 224 aaKnown RBP16.72■□□□□ 0.27
TMEM41A-201ENST00000296254 FAM237AA0A1B0GTK4 181 aa16.71■□□□□ 0.27
TMEM41A-201ENST00000296254 ZBED1O96006 694 aa16.71■□□□□ 0.27
TMEM41A-201ENST00000296254 C7P10643 843 aa16.71■□□□□ 0.27
TMEM41A-201ENST00000296254 MATKP42679 507 aa16.71■□□□□ 0.27
TMEM41A-201ENST00000296254 SYKP43405 635 aa16.71■□□□□ 0.27
TMEM41A-201ENST00000296254 TKTL1P51854 596 aa16.71■□□□□ 0.27
TMEM41A-201ENST00000296254 SLC8A3P57103 927 aa16.71■□□□□ 0.27
TMEM41A-201ENST00000296254 ADAM9Q13443 819 aa16.71■□□□□ 0.27
TMEM41A-201ENST00000296254 TRIP4Q15650 581 aaPredicted RBP16.71■□□□□ 0.27
TMEM41A-201ENST00000296254 PM20D1Q6GTS8 502 aa16.71■□□□□ 0.27
TMEM41A-201ENST00000296254 CCNI2Q6ZMN8 369 aaPredicted RBP16.71■□□□□ 0.27
TMEM41A-201ENST00000296254 ANKRD52Q8NB46 1076 aa16.71■□□□□ 0.27
TMEM41A-201ENST00000296254 FBXL13Q8NEE6 735 aa16.71■□□□□ 0.27
TMEM41A-201ENST00000296254 OR2T3Q8NH03 318 aa16.71■□□□□ 0.27
TMEM41A-201ENST00000296254 BAHD1Q8TBE0 780 aaPredicted RBP16.71■□□□□ 0.27
TMEM41A-201ENST00000296254 GAREM1Q9H706 876 aa16.71■□□□□ 0.27
TMEM41A-201ENST00000296254 TM7SF3Q9NS93 570 aa16.71■□□□□ 0.27
TMEM41A-201ENST00000296254 EIF2B4Q9UI10 523 aaKnown RBP16.71■□□□□ 0.27
TMEM41A-201ENST00000296254 APC2O95996 2303 aa16.7■□□□□ 0.26
TMEM41A-201ENST00000296254 TIMM44O43615 452 aa16.7■□□□□ 0.26
TMEM41A-201ENST00000296254 HLA-FP30511 346 aa16.7■□□□□ 0.26
TMEM41A-201ENST00000296254 NDUFA8P51970 172 aa16.7■□□□□ 0.26
TMEM41A-201ENST00000296254 ZNF445P59923 1031 aa16.7■□□□□ 0.26
TMEM41A-201ENST00000296254 ARID5AQ03989 594 aa16.7■□□□□ 0.26
TMEM41A-201ENST00000296254 CAMK2GQ13555 558 aaPredicted RBP16.7■□□□□ 0.26
TMEM41A-201ENST00000296254 EDRF1Q3B7T1 1238 aa16.7■□□□□ 0.26
TMEM41A-201ENST00000296254 FMNL3Q8IVF7 1028 aa16.7■□□□□ 0.26
TMEM41A-201ENST00000296254 SETD7Q8WTS6 366 aaKnown RBP16.7■□□□□ 0.26
TMEM41A-201ENST00000296254 ULBP1Q9BZM6 244 aa16.7■□□□□ 0.26
TMEM41A-201ENST00000296254 TMEM245Q9H330 911 aa16.7■□□□□ 0.26
TMEM41A-201ENST00000296254 OLA1Q9NTK5 396 aaKnown RBP16.7■□□□□ 0.26
TMEM41A-201ENST00000296254 RAB20Q9NX57 234 aa16.7■□□□□ 0.26
TMEM41A-201ENST00000296254 STOML2Q9UJZ1 356 aa16.7■□□□□ 0.26
TMEM41A-201ENST00000296254 GPSM3Q9Y4H4 160 aa16.7■□□□□ 0.26
TMEM41A-201ENST00000296254 SLCO1B1Q9Y6L6 691 aa16.7■□□□□ 0.26
TMEM41A-201ENST00000296254 ACACAQ13085 2346 aa16.69■□□□□ 0.26
TMEM41A-201ENST00000296254 TULP2O00295 520 aa16.69■□□□□ 0.26
TMEM41A-201ENST00000296254 XPO1O14980 1071 aaKnown RBP16.69■□□□□ 0.26
TMEM41A-201ENST00000296254 HLA-EP13747 358 aa16.69■□□□□ 0.26
TMEM41A-201ENST00000296254 HARS2P49590 506 aaKnown RBP16.69■□□□□ 0.26
TMEM41A-201ENST00000296254 AFF3P51826 1226 aaKnown RBP16.69■□□□□ 0.26
TMEM41A-201ENST00000296254 BCAT1P54687 386 aa16.69■□□□□ 0.26
TMEM41A-201ENST00000296254 PDE4CQ08493 712 aa16.69■□□□□ 0.26
TMEM41A-201ENST00000296254 GOLGA7BQ2TAP0 167 aa16.69■□□□□ 0.26
TMEM41A-201ENST00000296254 HLA-BQ31612 363 aa16.69■□□□□ 0.26
TMEM41A-201ENST00000296254 MPPE1Q53F39 396 aa16.69■□□□□ 0.26
TMEM41A-201ENST00000296254 SLCO6A1Q86UG4 719 aa16.69■□□□□ 0.26
TMEM41A-201ENST00000296254 FAM124AQ86V42 546 aa16.69■□□□□ 0.26
TMEM41A-201ENST00000296254 WFIKKN2Q8TEU8 576 aa16.69■□□□□ 0.26
TMEM41A-201ENST00000296254 EEF2KMTQ96G04 330 aa16.69■□□□□ 0.26
TMEM41A-201ENST00000296254 SPATA32Q96LK8 384 aa16.69■□□□□ 0.26
TMEM41A-201ENST00000296254 LHX5Q9H2C1 402 aa16.69■□□□□ 0.26
TMEM41A-201ENST00000296254 TOR4AQ9NXH8 423 aa16.69■□□□□ 0.26
TMEM41A-201ENST00000296254 TSPAN16Q9UKR8 245 aa16.69■□□□□ 0.26
TMEM41A-201ENST00000296254 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.69■□□□□ 0.26
TMEM41A-201ENST00000296254 HBS1LQ9Y450 684 aaKnown RBP16.69■□□□□ 0.26
TMEM41A-201ENST00000296254 PCDHGB2Q9Y5G2 931 aa16.69■□□□□ 0.26
TMEM41A-201ENST00000296254 A0A1B0GVT2 93 aa16.68■□□□□ 0.26
TMEM41A-201ENST00000296254 FLRT2O43155 660 aa16.68■□□□□ 0.26
TMEM41A-201ENST00000296254 DKK1O94907 266 aa16.68■□□□□ 0.26
TMEM41A-201ENST00000296254 LATS1O95835 1130 aa16.68■□□□□ 0.26
TMEM41A-201ENST00000296254 KRT85P78386 507 aa16.68■□□□□ 0.26
TMEM41A-201ENST00000296254 ADIGQ0VDE8 80 aa16.68■□□□□ 0.26
TMEM41A-201ENST00000296254 ACAP1Q15027 740 aa16.68■□□□□ 0.26
TMEM41A-201ENST00000296254 FNDC3BQ53EP0 1204 aaKnown RBP16.68■□□□□ 0.26
TMEM41A-201ENST00000296254 DBX2Q6ZNG2 339 aa16.68■□□□□ 0.26
TMEM41A-201ENST00000296254 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms