RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 TNFSF13BQ9Y275 285 aa17.68■□□□□ 0.42
CDCP1-201ENST00000296129 ATP9AO75110 1047 aa17.68■□□□□ 0.42
CDCP1-201ENST00000296129 ARMC6Q6NXE6 501 aa17.68■□□□□ 0.42
CDCP1-201ENST00000296129 B4GALNT2Q8NHY0 566 aa17.68■□□□□ 0.42
CDCP1-201ENST00000296129 UCMAQ8WVF2 138 aa17.68■□□□□ 0.42
CDCP1-201ENST00000296129 TBL1YQ9BQ87 522 aa17.68■□□□□ 0.42
CDCP1-201ENST00000296129 SYTL2Q9HCH5 934 aa17.68■□□□□ 0.42
CDCP1-201ENST00000296129 KDM1AO60341 852 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 CYP1A2P05177 515 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 FGRP09769 529 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 KDELR1P24390 212 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 SKOR1P84550 965 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 ACAP1Q15027 740 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 RASA2Q15283 850 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 KCNT2Q6UVM3 1135 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 ADAM2Q99965 735 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 ULBP1Q9BZM6 244 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 HPS4Q9NQG7 708 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 VHLP40337 213 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 SPANXN3Q5MJ09 141 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 APBB2Q92870 758 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 SENP8Q96LD8 212 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 ACO2Q99798 780 aaKnown RBP17.67■□□□□ 0.42
CDCP1-201ENST00000296129 CIPCQ9C0C6 399 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 NRCAMQ92823 1304 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 C15orf59Q2T9L4 293 aaPredicted RBP17.67■□□□□ 0.42
CDCP1-201ENST00000296129 TAGLN3Q9UI15 199 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 HACD1B0YJ81 288 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 APOC4-APOC2K7ER74 178 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 KCNK1O00180 336 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 APOC2P02655 101 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 GRK2P25098 689 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 TATDN1Q6P1N9 297 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 FHDC1Q9C0D6 1143 aaPredicted RBP17.67■□□□□ 0.42
CDCP1-201ENST00000296129 EFCAB1Q9HAE3 211 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 SMPD4Q9NXE4 827 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 TOMM70O94826 608 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 ITGB5P18084 799 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 RBL1P28749 1068 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 CD151P48509 253 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 OTOAQ7RTW8 1153 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 TRIM48Q8IWZ4 208 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 ATP13A1Q9HD20 1204 aa17.67■□□□□ 0.42
CDCP1-201ENST00000296129 SERPINF2P08697 491 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 SCNN1GP51170 649 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 WASHC5Q12768 1159 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 FAM183BPQ6ZVS7 135 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 SCUBE1Q8IWY4 988 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 LGI2Q8N0V4 545 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 NCKIPSDQ9NZQ3 722 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 TRHDEQ9UKU6 1024 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 HES2Q9Y543 173 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 SPATA31C2B4DYI2 1134 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 NR5A2O00482 541 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 TPST1O60507 370 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 ZSCAN5DPP0CG00 497 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 NCKAP1LP55160 1127 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 HPCAP84074 193 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 TMEM86AQ8N2M4 240 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 TCP10LQ8TDR4 215 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 BAZ2BQ9UIF8 2168 aaKnown RBP17.66■□□□□ 0.42
CDCP1-201ENST00000296129 ERI2A8K979 691 aaKnown RBP17.66■□□□□ 0.42
CDCP1-201ENST00000296129 DDHD2O94830 711 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 LTFP02788 710 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 HOXC6P09630 235 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 PSMA4P25789 261 aaKnown RBP17.66■□□□□ 0.42
CDCP1-201ENST00000296129 IFI35P80217 286 aaPredicted RBP17.66■□□□□ 0.42
CDCP1-201ENST00000296129 ZBTB17Q13105 803 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 CRY2Q49AN0 593 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 WSCD1Q658N2 575 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 NPNTQ6UXI9 565 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 RTN3O95197 1032 aaPredicted RBP17.66■□□□□ 0.42
CDCP1-201ENST00000296129 CALB2P22676 271 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 SLC1A6P48664 564 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 DPYSL3Q14195 570 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 SAE1Q9UBE0 346 aaPredicted RBP17.66■□□□□ 0.42
CDCP1-201ENST00000296129 PNMA8BQ9ULN7 279 aaPredicted RBP17.66■□□□□ 0.42
CDCP1-201ENST00000296129 PTPN1P18031 435 aaKnown RBP17.66■□□□□ 0.42
CDCP1-201ENST00000296129 KCNA4P22459 653 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 HNRNPH1P31943 449 aaKnown RBP17.66■□□□□ 0.42
CDCP1-201ENST00000296129 RENBPP51606 427 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 PKN2Q16513 984 aaKnown RBP17.66■□□□□ 0.42
CDCP1-201ENST00000296129 BNC2Q6ZN30 1099 aaPredicted RBP17.66■□□□□ 0.42
CDCP1-201ENST00000296129 APOPT1Q96IL0 206 aa17.66■□□□□ 0.42
CDCP1-201ENST00000296129 ETS1P14921 441 aa17.65■□□□□ 0.42
CDCP1-201ENST00000296129 GP5P40197 560 aa17.65■□□□□ 0.42
CDCP1-201ENST00000296129 NPY2RP49146 381 aa17.65■□□□□ 0.42
CDCP1-201ENST00000296129 PGS1Q32NB8 556 aa17.65■□□□□ 0.42
CDCP1-201ENST00000296129 MOB2Q70IA6 237 aa17.65■□□□□ 0.42
CDCP1-201ENST00000296129 FAM71AQ8IYT1 594 aa17.65■□□□□ 0.42
CDCP1-201ENST00000296129 CNBD2Q96M20 576 aa17.65■□□□□ 0.42
CDCP1-201ENST00000296129 CPNE1Q99829 537 aa17.65■□□□□ 0.42
CDCP1-201ENST00000296129 CTNNAL1Q9UBT7 734 aa17.65■□□□□ 0.42
CDCP1-201ENST00000296129 NUDT5Q9UKK9 219 aa17.65■□□□□ 0.42
CDCP1-201ENST00000296129 SIGLEC16A6NMB1 481 aa17.65■□□□□ 0.42
CDCP1-201ENST00000296129 BLOC1S6Q9UL45 172 aa17.65■□□□□ 0.42
CDCP1-201ENST00000296129 EPB42P16452 691 aa17.65■□□□□ 0.42
CDCP1-201ENST00000296129 ITGB6P18564 788 aa17.65■□□□□ 0.42
CDCP1-201ENST00000296129 RRP1BQ14684 758 aaKnown RBP17.65■□□□□ 0.42
CDCP1-201ENST00000296129 TREML2Q5T2D2 321 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms