RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 SLC39A13Q96H72 371 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 ALS2CR12Q96Q35 445 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 TKTL2Q9H0I9 626 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 AMFRQ9UKV5 643 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 PRPSAP2O60256 369 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 KLKB1P03952 638 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 DESP17661 470 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 DDX6P26196 483 aaKnown RBP eCLIP15.73■□□□□ 0.11
CCDC140-201ENST00000295226 GBP2P32456 591 aaPredicted RBP15.73■□□□□ 0.11
CCDC140-201ENST00000295226 PCK1P35558 622 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 VIPR2P41587 438 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 SLC1A1P43005 524 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 CA9Q16790 459 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 FAM78AQ5JUQ0 283 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 SND1Q7KZF4 910 aaKnown RBP eCLIP15.73■□□□□ 0.11
CCDC140-201ENST00000295226 SYCE1Q8N0S2 351 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 PYROXD2Q8N2H3 581 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 CEP112Q8N8E3 955 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 MAFAQ8NHW3 353 aaPredicted RBP15.73■□□□□ 0.11
CCDC140-201ENST00000295226 SH3RF2Q8TEC5 729 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 HSPH1Q92598 858 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 CD101Q93033 1021 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 CALR3Q96L12 384 aaKnown RBP15.73■□□□□ 0.11
CCDC140-201ENST00000295226 CFAP97Q9P2B7 532 aa15.73■□□□□ 0.11
CCDC140-201ENST00000295226 KCNU1A8MYU2 1149 aa15.72■□□□□ 0.11
CCDC140-201ENST00000295226 LEFTY2O00292 366 aa15.72■□□□□ 0.11
CCDC140-201ENST00000295226 MBTPS2O43462 519 aa15.72■□□□□ 0.11
CCDC140-201ENST00000295226 IGLV3-27P01718 113 aa15.72■□□□□ 0.11
CCDC140-201ENST00000295226 RARAP10276 462 aa15.72■□□□□ 0.11
CCDC140-201ENST00000295226 CCR1P32246 355 aa15.72■□□□□ 0.11
CCDC140-201ENST00000295226 ADRA1BP35368 520 aa15.72■□□□□ 0.11
CCDC140-201ENST00000295226 COG7P83436 770 aa15.72■□□□□ 0.11
CCDC140-201ENST00000295226 LLGL1Q15334 1064 aa15.72■□□□□ 0.11
CCDC140-201ENST00000295226 MEI1Q5TIA1 1274 aa15.72■□□□□ 0.11
CCDC140-201ENST00000295226 DENND1CQ8IV53 801 aa15.72■□□□□ 0.11
CCDC140-201ENST00000295226 RSPRY1Q96DX4 576 aa15.72■□□□□ 0.11
CCDC140-201ENST00000295226 LRRC3BQ96PB8 259 aa15.72■□□□□ 0.11
CCDC140-201ENST00000295226 PSMB7Q99436 277 aa15.72■□□□□ 0.11
CCDC140-201ENST00000295226 NAPGQ99747 312 aaPredicted RBP15.72■□□□□ 0.11
CCDC140-201ENST00000295226 SNRNP25Q9BV90 132 aaKnown RBP15.72■□□□□ 0.11
CCDC140-201ENST00000295226 SIK2Q9H0K1 926 aa15.72■□□□□ 0.11
CCDC140-201ENST00000295226 TDP1Q9NUW8 608 aa15.72■□□□□ 0.11
CCDC140-201ENST00000295226 ARGLU1Q9NWB6 273 aaPredicted RBP15.72■□□□□ 0.11
CCDC140-201ENST00000295226 CDH7Q9ULB5 785 aa15.72■□□□□ 0.11
CCDC140-201ENST00000295226 HBS1LQ9Y450 684 aaKnown RBP15.72■□□□□ 0.11
CCDC140-201ENST00000295226 GOLGA6L7A0A1B0GV03 622 aa15.71■□□□□ 0.11
CCDC140-201ENST00000295226 PI4K2BG5E9Z4 385 aa15.71■□□□□ 0.11
CCDC140-201ENST00000295226 CORO1AP31146 461 aaKnown RBP15.71■□□□□ 0.11
CCDC140-201ENST00000295226 ZFYVE27Q5T4F4 411 aa15.71■□□□□ 0.11
CCDC140-201ENST00000295226 ALG3Q92685 438 aa15.71■□□□□ 0.11
CCDC140-201ENST00000295226 TLR10Q9BXR5 811 aa15.71■□□□□ 0.11
CCDC140-201ENST00000295226 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.71■□□□□ 0.11
CCDC140-201ENST00000295226 ARHGEF38Q9NXL2 777 aa15.71■□□□□ 0.11
CCDC140-201ENST00000295226 LCMT1Q9UIC8 334 aa15.71■□□□□ 0.11
CCDC140-201ENST00000295226 CDC23Q9UJX2 597 aa15.71■□□□□ 0.11
CCDC140-201ENST00000295226 FZD10Q9ULW2 581 aa15.71■□□□□ 0.11
CCDC140-201ENST00000295226 ARHGAP26Q9UNA1 814 aa15.71■□□□□ 0.11
CCDC140-201ENST00000295226 TRDMT1O14717 391 aaKnown RBP15.7■□□□□ 0.1
CCDC140-201ENST00000295226 DDX3YO15523 660 aaKnown RBP15.7■□□□□ 0.1
CCDC140-201ENST00000295226 GREM1O60565 184 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 PAGE1O75459 146 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 ATP1A1P05023 1023 aaKnown RBP15.7■□□□□ 0.1
CCDC140-201ENST00000295226 NNTQ13423 1086 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 SMAD4Q13485 552 aaKnown RBP15.7■□□□□ 0.1
CCDC140-201ENST00000295226 PPP2R5DQ14738 602 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 ELF2Q15723 593 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 HADHQ16836 314 aaKnown RBP15.7■□□□□ 0.1
CCDC140-201ENST00000295226 ERMARDQ5T6L9 678 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 RHOT1Q8IXI2 618 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 RAPGEF5Q92565 580 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 ASB16Q96NS5 453 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 CARD6Q9BX69 1037 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 DHX35Q9H5Z1 703 aaKnown RBP15.7■□□□□ 0.1
CCDC140-201ENST00000295226 GDE1Q9NZC3 331 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 AGO1Q9UL18 857 aaKnown RBP15.7■□□□□ 0.1
CCDC140-201ENST00000295226 FAM72CH0Y354 149 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 APOEP02649 317 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 CD48P09326 243 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 LAMP2P13473 410 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 PFKLP17858 780 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 HARS2P49590 506 aaKnown RBP15.7■□□□□ 0.1
CCDC140-201ENST00000295226 PEX5P50542 639 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 KPNA1P52294 538 aaPredicted RBP15.7■□□□□ 0.1
CCDC140-201ENST00000295226 RING1Q06587 406 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 WHAMMP3Q1A5X7 153 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 BRMS1LQ5PSV4 323 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 FAM72AQ5TYM5 149 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 PIK3R6Q5UE93 754 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 NADSYN1Q6IA69 706 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 TANGO2Q6ICL3 276 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 FAM72DQ6L9T8 149 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 AADACL2Q6P093 401 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 C14orf80Q86SX3 495 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 FAM72BQ86X60 149 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 SMARCD2Q92925 531 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 PLD4Q96BZ4 506 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 MYEOVQ96EZ4 313 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 HES6Q96HZ4 224 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 NECTIN4Q96NY8 510 aa15.7■□□□□ 0.1
CCDC140-201ENST00000295226 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms