RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 LRFN2Q9ULH4 789 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 ALPK3Q96L96 1907 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 SF3B1O75533 1304 aaKnown RBP eCLIP9.47□□□□□ -0.89
PDPN-201ENST00000294489 CHADO15335 359 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 TADA2AO75478 443 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 LTFP02788 710 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 ALDH2P05091 517 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 RBL1P28749 1068 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 ATN1P54259 1190 aaPredicted RBP9.47□□□□□ -0.89
PDPN-201ENST00000294489 ELAVL2Q12926 359 aaKnown RBP9.47□□□□□ -0.89
PDPN-201ENST00000294489 NR1H3Q13133 447 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 SEMA3BQ13214 749 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 VSTM1Q6UX27 236 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 ABI1Q8IZP0 508 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 LRRC43Q8N309 656 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 XPO6Q96QU8 1125 aaKnown RBP9.47□□□□□ -0.89
PDPN-201ENST00000294489 TRIM62Q9BVG3 475 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 FRMD8Q9BZ67 464 aaPredicted RBP9.47□□□□□ -0.89
PDPN-201ENST00000294489 GPR62Q9BZJ7 368 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 RAB6BQ9NRW1 208 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 CTNNAL1Q9UBT7 734 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 TBK1Q9UHD2 729 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 NAALADL1Q9UQQ1 740 aa9.47□□□□□ -0.89
PDPN-201ENST00000294489 SYNJ2BP-COX16A0A087WUM0 186 aa9.46□□□□□ -0.89
PDPN-201ENST00000294489 FAM92AA1XBS5 289 aa9.46□□□□□ -0.89
PDPN-201ENST00000294489 H3BRJ5 948 aa9.46□□□□□ -0.89
PDPN-201ENST00000294489 KIAA0355O15063 1070 aa9.46□□□□□ -0.89
PDPN-201ENST00000294489 CLTBP09497 229 aa9.46□□□□□ -0.89
PDPN-201ENST00000294489 USP17L7P0C7H9 530 aa9.46□□□□□ -0.89
PDPN-201ENST00000294489 RABGGTBP53611 331 aa9.46□□□□□ -0.89
PDPN-201ENST00000294489 CCL23P55773 120 aa9.46□□□□□ -0.89
PDPN-201ENST00000294489 PITX1P78337 314 aaPredicted RBP9.46□□□□□ -0.89
PDPN-201ENST00000294489 SMARCB1Q12824 385 aa9.46□□□□□ -0.89
PDPN-201ENST00000294489 NME3Q13232 169 aa9.46□□□□□ -0.89
PDPN-201ENST00000294489 NFE2Q16621 373 aaPredicted RBP9.46□□□□□ -0.89
PDPN-201ENST00000294489 EFHC2Q5JST6 749 aa9.46□□□□□ -0.89
PDPN-201ENST00000294489 SPATA2LQ8IUW3 424 aaPredicted RBP9.46□□□□□ -0.89
PDPN-201ENST00000294489 ANKMY2Q8IV38 441 aa9.46□□□□□ -0.89
PDPN-201ENST00000294489 PALM2Q8IXS6 379 aa9.46□□□□□ -0.89
PDPN-201ENST00000294489 CCDC13Q8IYE1 715 aa9.46□□□□□ -0.89
PDPN-201ENST00000294489 ZNF473Q8WTR7 871 aaKnown RBP9.46□□□□□ -0.89
PDPN-201ENST00000294489 FAM107BQ9H098 131 aa9.46□□□□□ -0.89
PDPN-201ENST00000294489 C11orf49Q9H6J7 331 aa9.46□□□□□ -0.89
PDPN-201ENST00000294489 PIGVQ9NUD9 493 aa9.46□□□□□ -0.89
PDPN-201ENST00000294489 COX16Q9P0S2 106 aa9.46□□□□□ -0.89
PDPN-201ENST00000294489 ACTL7BQ9Y614 415 aa9.46□□□□□ -0.89
PDPN-201ENST00000294489 E7ESA3 106 aa9.46□□□□□ -0.9
PDPN-201ENST00000294489 TMEM63AO94886 807 aa9.46□□□□□ -0.9
PDPN-201ENST00000294489 MAP3K6O95382 1288 aa9.46□□□□□ -0.9
PDPN-201ENST00000294489 VNN2O95498 520 aa9.46□□□□□ -0.9
PDPN-201ENST00000294489 TSHRP16473 764 aa9.46□□□□□ -0.9
PDPN-201ENST00000294489 GOT1P17174 413 aa9.46□□□□□ -0.9
PDPN-201ENST00000294489 HCAR3P49019 387 aa9.46□□□□□ -0.9
PDPN-201ENST00000294489 CXCR3P49682 368 aa9.46□□□□□ -0.9
PDPN-201ENST00000294489 LRRC26Q2I0M4 334 aa9.46□□□□□ -0.9
PDPN-201ENST00000294489 BBS9Q3SYG4 887 aa9.46□□□□□ -0.9
PDPN-201ENST00000294489 SLC45A4Q5BKX6 768 aa9.46□□□□□ -0.9
PDPN-201ENST00000294489 FNBP1LQ5T0N5 605 aa9.46□□□□□ -0.9
PDPN-201ENST00000294489 ARTNQ5T4W7 220 aa9.46□□□□□ -0.9
PDPN-201ENST00000294489 CAPN12Q6ZSI9 719 aa9.46□□□□□ -0.9
PDPN-201ENST00000294489 TADA2BQ86TJ2 420 aa9.46□□□□□ -0.9
PDPN-201ENST00000294489 SPATS2Q86XZ4 545 aaKnown RBP9.46□□□□□ -0.9
PDPN-201ENST00000294489 TDRPQ86YL5 185 aa9.46□□□□□ -0.9
PDPN-201ENST00000294489 SLC7A14Q8TBB6 771 aa9.46□□□□□ -0.9
PDPN-201ENST00000294489 C2orf15Q8WU43 125 aaKnown RBP9.46□□□□□ -0.9
PDPN-201ENST00000294489 BCL7CQ8WUZ0 217 aaPredicted RBP9.46□□□□□ -0.9
PDPN-201ENST00000294489 FERMT1Q9BQL6 677 aa9.46□□□□□ -0.9
PDPN-201ENST00000294489 COMMD8Q9NX08 183 aa9.46□□□□□ -0.9
PDPN-201ENST00000294489 FBXW11Q9UKB1 542 aa9.46□□□□□ -0.9
PDPN-201ENST00000294489 TCRBV7S3A2A0A539 114 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 POC1B-GALNT4F8VUJ3 575 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 NCAM1P13591 858 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 NRLP54845 237 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 GBE1Q04446 702 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 IKBKEQ14164 716 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 SLC39A12Q504Y0 691 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 HEATR6Q6AI08 1181 aaKnown RBP9.45□□□□□ -0.9
PDPN-201ENST00000294489 FUT10Q6P4F1 479 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.45□□□□□ -0.9
PDPN-201ENST00000294489 C3orf62Q6ZUJ4 267 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 PLCD3Q8N3E9 789 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 DYDC1Q8WWB3 177 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 KCNK9Q9NPC2 374 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 SLC24A2Q9UI40 661 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 SCML2Q9UQR0 700 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 ABHD14A-ACY1A0A1B0GW23 586 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 TBKBP1A7MCY6 615 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 HACD1B0YJ81 288 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 TRIM66O15016 1216 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 F9P00740 461 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 TIMP1P01033 207 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 MYCP01106 439 aaPredicted RBP9.45□□□□□ -0.9
PDPN-201ENST00000294489 BRAFP15056 766 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 AMPD1P23109 780 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 ZNF135P52742 658 aaPredicted RBP9.45□□□□□ -0.9
PDPN-201ENST00000294489 DPYSQ14117 519 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 KCNJ11Q14654 390 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 TMED2Q15363 201 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 ARL13BQ3SXY8 428 aa9.45□□□□□ -0.9
PDPN-201ENST00000294489 NCBP2-AS2Q69YL0 99 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms