RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 NFKBIZQ9BYH8 718 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 DKK3Q9UBP4 350 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 PLEKHG2Q9H7P9 1386 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 RPA1P27694 616 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 PCSK1P29120 753 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 ZNF157P51786 506 aaPredicted RBP16.51■□□□□ 0.23
SSRP1-202ENST00000293880 MACC1Q6ZN28 852 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 DHFR2Q86XF0 187 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 WDR60Q8WVS4 1066 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 ATG4CQ96DT6 458 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 CITED4Q96RK1 184 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 ERGIC2Q96RQ1 377 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 MID1IP1Q9NPA3 183 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 MIEF1Q9NQG6 463 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 ARP10275 920 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 LGALS3BPQ08380 585 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 TAF1CQ15572 869 aaPredicted RBP16.51■□□□□ 0.23
SSRP1-202ENST00000293880 FAR2Q96K12 515 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 CLPBQ9H078 707 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 LRRC40Q9H9A6 602 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 GLI2P10070 1586 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 TRPM1Q7Z4N2 1603 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 SNTNA6NMZ2 147 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 ZNF286BP0CG31 522 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 ATP6V1C1P21283 382 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 ABCG1P45844 678 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 DGCR6Q14129 220 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 TTLL9Q3SXZ7 439 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 ZKSCAN4Q969J2 545 aaPredicted RBP16.5■□□□□ 0.23
SSRP1-202ENST00000293880 O00370 1275 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 TBX3O15119 743 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 JCHAINP01591 159 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 SLC11A2P49281 568 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 SERPINH1P50454 418 aaKnown RBP16.5■□□□□ 0.23
SSRP1-202ENST00000293880 PLK1P53350 603 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 SEMA3FQ13275 785 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 CACUL1Q86Y37 369 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 PDGFCQ9NRA1 345 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 CYP11B2P19099 503 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 FASP25445 335 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 SLC34A1Q06495 639 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 PKN2Q16513 984 aaKnown RBP16.5■□□□□ 0.23
SSRP1-202ENST00000293880 GLB1LQ6UWU2 654 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 EID3Q8N140 333 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 ADAM32Q8TC27 787 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 LRRN4Q8WUT4 740 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 RMND5BQ96G75 393 aaPredicted RBP16.5■□□□□ 0.23
SSRP1-202ENST00000293880 RSPH9Q9H1X1 276 aaPredicted RBP16.5■□□□□ 0.23
SSRP1-202ENST00000293880 EHD4Q9H223 541 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 H3BN98 237 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 RGS20O76081 388 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 HK2P52789 917 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 PPATQ06203 517 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 TRAF3Q13114 568 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 PHKG1Q16816 387 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 C4orf22Q6V702 233 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 KYQ8NBH2 561 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 TATDN2Q93075 761 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 TOR4AQ9NXH8 423 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 ERAP1Q9NZ08 941 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 MTRF1O75570 445 aaKnown RBP16.5■□□□□ 0.23
SSRP1-202ENST00000293880 ERVK-10P10266 1014 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 LSM3P62310 102 aaKnown RBP16.5■□□□□ 0.23
SSRP1-202ENST00000293880 FAM98BQ52LJ0 330 aaKnown RBP16.5■□□□□ 0.23
SSRP1-202ENST00000293880 TRAPPC9Q96Q05 1148 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 CCDC167Q9P0B6 97 aa16.5■□□□□ 0.23
SSRP1-202ENST00000293880 TIMM44O43615 452 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 ETS1P14921 441 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 CYP4F2P78329 520 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 CYP4F3Q08477 520 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 RD3Q7Z3Z2 195 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 CYP4Z2PQ8N1L4 340 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 CHID1Q9BWS9 393 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 ATXN3LQ9H3M9 355 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 ATAD3AQ9NVI7 634 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 MED14O60244 1454 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 TET3O43151 1660 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 TM9SF1O15321 606 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 STAG3L1P0CL83 205 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 RPA3P35244 121 aaPredicted RBP16.49■□□□□ 0.23
SSRP1-202ENST00000293880 VPS28Q9UK41 221 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 ATXN2Q99700 1313 aaKnown RBP16.49■□□□□ 0.23
SSRP1-202ENST00000293880 BANF1O75531 89 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 CASP12Q6UXS9 341 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 SLC26A11Q86WA9 606 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 ACTRT1Q8TDG2 376 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 ELOVL6Q9H5J4 265 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 TCF7L2Q9NQB0 619 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 GTF3C4Q9UKN8 822 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 PPIEQ9UNP9 301 aaKnown RBP16.49■□□□□ 0.23
SSRP1-202ENST00000293880 CDC42BPBQ9Y5S2 1711 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 ALKQ9UM73 1620 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 FCHO1O14526 889 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 MPOP05164 745 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 SSTR1P30872 391 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 C1DQ13901 141 aaKnown RBP16.49■□□□□ 0.23
SSRP1-202ENST00000293880 ADRM1Q16186 407 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 FBXO16Q8IX29 292 aaPredicted RBP16.49■□□□□ 0.23
SSRP1-202ENST00000293880 RNF19AQ9NV58 838 aa16.49■□□□□ 0.23
SSRP1-202ENST00000293880 COG5Q9UP83 839 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms