RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 AHCYL2Q96HN2 611 aaKnown RBP17.72■□□□□ 0.43
SHANK1-201ENST00000293441 MFSD1Q9H3U5 465 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 RNF103O00237 685 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 CYP7B1O75881 506 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 CELF3Q5SZQ8 465 aaKnown RBP17.72■□□□□ 0.43
SHANK1-201ENST00000293441 PNMA5Q96PV4 448 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 OSBPL10Q9BXB5 764 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 TKTL2Q9H0I9 626 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 CAAP1Q9H8G2 361 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 ARHGAP20Q9P2F6 1191 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 DCCP43146 1447 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 SERPINI2O75830 405 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 ABCB1P08183 1280 aaPredicted RBP17.72■□□□□ 0.43
SHANK1-201ENST00000293441 GSTM1P09488 218 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 POLR2EP19388 210 aaKnown RBP17.72■□□□□ 0.43
SHANK1-201ENST00000293441 TUFMP49411 452 aaKnown RBP17.72■□□□□ 0.43
SHANK1-201ENST00000293441 ATP6AP1LQ52LC2 224 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 TMEM159Q96B96 161 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 ZSCAN32Q9NX65 697 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 UMODL1Q5DID0 1318 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 KCNA3P22001 575 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 FKBP1AP62942 108 aaKnown RBP17.72■□□□□ 0.43
SHANK1-201ENST00000293441 ITGA9Q13797 1035 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 ZNF268Q14587 947 aaPredicted RBP17.72■□□□□ 0.43
SHANK1-201ENST00000293441 SYTL1Q8IYJ3 562 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 MAGEB18Q96M61 343 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 COL5A2P05997 1499 aaPredicted RBP17.71■□□□□ 0.43
SHANK1-201ENST00000293441 PRR23D1E9PI22 279 aaPredicted RBP17.71■□□□□ 0.43
SHANK1-201ENST00000293441 AGRPO00253 132 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 KPNA3O00505 521 aaPredicted RBP17.71■□□□□ 0.43
SHANK1-201ENST00000293441 ZNF682O95780 498 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 PGK1P00558 417 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 PRR23D2P0DMB1 279 aaPredicted RBP17.71■□□□□ 0.43
SHANK1-201ENST00000293441 CSTF3Q12996 717 aaKnown RBP17.71■□□□□ 0.43
SHANK1-201ENST00000293441 TMEM119Q4V9L6 283 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 IQGAP1P46940 1657 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 ANKRD63C9JTQ0 380 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 DAB1O75553 588 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 TPBGLP0DKB5 382 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 THRAP10827 490 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 MGAT1P26572 445 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 CYLC2Q14093 348 aaPredicted RBP17.71■□□□□ 0.43
SHANK1-201ENST00000293441 MRPL17Q9NRX2 175 aaKnown RBP17.71■□□□□ 0.43
SHANK1-201ENST00000293441 TMCC3Q9ULS5 477 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 DEAF1O75398 565 aaPredicted RBP17.71■□□□□ 0.43
SHANK1-201ENST00000293441 SLC2A4P14672 509 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 CPA3P15088 417 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 BCL2L1Q07817 233 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 ZPBP2Q6X784 338 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 NLRP9Q7RTR0 991 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 SLC26A11Q86WA9 606 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 RIOX2Q8IUF8 465 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 C3orf20Q8ND61 904 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 NDOR1Q9UHB4 597 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 VWDEQ8N2E2 1590 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 NR6A1Q15406 480 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 CATSPERGQ6ZRH7 1159 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 BRSK2Q8IWQ3 736 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 SUGP1Q8IWZ8 645 aaKnown RBP17.71■□□□□ 0.43
SHANK1-201ENST00000293441 SENP8Q96LD8 212 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 TINF2Q9BSI4 451 aa17.71■□□□□ 0.43
SHANK1-201ENST00000293441 E9PBE3 544 aa17.71■□□□□ 0.42
SHANK1-201ENST00000293441 KLHL41O60662 606 aa17.71■□□□□ 0.42
SHANK1-201ENST00000293441 SCNN1GP51170 649 aa17.71■□□□□ 0.42
SHANK1-201ENST00000293441 FIGNQ5HY92 759 aa17.71■□□□□ 0.42
SHANK1-201ENST00000293441 CCT7Q99832 543 aa17.71■□□□□ 0.42
SHANK1-201ENST00000293441 TBL1YQ9BQ87 522 aa17.71■□□□□ 0.42
SHANK1-201ENST00000293441 ZDHHC6Q9H6R6 413 aa17.71■□□□□ 0.42
SHANK1-201ENST00000293441 MAP10Q9P2G4 905 aa17.71■□□□□ 0.42
SHANK1-201ENST00000293441 RAD54BQ9Y620 910 aa17.71■□□□□ 0.42
SHANK1-201ENST00000293441 BGNP21810 368 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 MGAT5Q09328 741 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 FRMPD4Q14CM0 1322 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 UBTFL6P0CB48 400 aaPredicted RBP17.7■□□□□ 0.42
SHANK1-201ENST00000293441 CYP2A6P11509 494 aaPredicted RBP17.7■□□□□ 0.42
SHANK1-201ENST00000293441 ZNF23P17027 643 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 MTA1Q13330 715 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 HTR3CQ8WXA8 447 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 EFCAB1Q9HAE3 211 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 GAKO14976 1311 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 MT-CO1P00395 513 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 MPOP05164 745 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 UBA1P22314 1058 aaKnown RBP17.7■□□□□ 0.42
SHANK1-201ENST00000293441 CD151P48509 253 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 CDH17Q12864 832 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 LLGL2Q6P1M3 1020 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 CYP4Z1Q86W10 505 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 KCNMB4Q86W47 210 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 PURBQ96QR8 312 aaKnown RBP17.7■□□□□ 0.42
SHANK1-201ENST00000293441 PTPRHQ9HD43 1115 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 FAM198AQ9UFP1 575 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 MAGEB16A2A368 324 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 PIK3CDO00329 1044 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 RARGP13631 454 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 PTPN3P26045 913 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 CCL23P55773 120 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 SLC6A3Q01959 620 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 PRKAA1Q13131 559 aa17.7■□□□□ 0.42
SHANK1-201ENST00000293441 DYNC1I2Q13409 638 aaKnown RBP17.7■□□□□ 0.42
SHANK1-201ENST00000293441 ANGPT1Q15389 498 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms