RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 PLPPR4Q7Z2D5 763 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 PRPF39Q86UA1 669 aaKnown RBP10.71□□□□□ -0.69
SKA1-201ENST00000285116 PLD5Q8N7P1 536 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 ZNF670Q9BS34 389 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 FAM96AQ9H5X1 160 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 C10orf88Q9H8K7 445 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 RRAGCQ9HB90 399 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 TJP2Q9UDY2 1190 aa10.71□□□□□ -0.69
SKA1-201ENST00000285116 HBS1LQ9Y450 684 aaKnown RBP10.71□□□□□ -0.69
SKA1-201ENST00000285116 SLC15A5A6NIM6 579 aa10.71□□□□□ -0.7
SKA1-201ENST00000285116 SPDYE16A6NNV3 312 aaPredicted RBP10.71□□□□□ -0.7
SKA1-201ENST00000285116 ZBTB42B2RXF5 422 aa10.71□□□□□ -0.7
SKA1-201ENST00000285116 E5RJQ4 531 aa10.71□□□□□ -0.7
SKA1-201ENST00000285116 ALDH1A2O94788 518 aa10.71□□□□□ -0.7
SKA1-201ENST00000285116 IL4RP24394 825 aa10.71□□□□□ -0.7
SKA1-201ENST00000285116 ERFP50548 548 aa10.71□□□□□ -0.7
SKA1-201ENST00000285116 IRX4P78413 519 aa10.71□□□□□ -0.7
SKA1-201ENST00000285116 SP4Q02446 784 aa10.71□□□□□ -0.7
SKA1-201ENST00000285116 PDK3Q15120 406 aa10.71□□□□□ -0.7
SKA1-201ENST00000285116 MMEL1Q495T6 779 aa10.71□□□□□ -0.7
SKA1-201ENST00000285116 ANKRD20A4Q4UJ75 823 aa10.71□□□□□ -0.7
SKA1-201ENST00000285116 ZNF394Q53GI3 561 aa10.71□□□□□ -0.7
SKA1-201ENST00000285116 CDHR3Q6ZTQ4 885 aa10.71□□□□□ -0.7
SKA1-201ENST00000285116 GSDMBQ8TAX9 411 aa10.71□□□□□ -0.7
SKA1-201ENST00000285116 SEPT1Q8WYJ6 367 aa10.71□□□□□ -0.7
SKA1-201ENST00000285116 BTBD9Q96Q07 612 aa10.71□□□□□ -0.7
SKA1-201ENST00000285116 ELOVL4Q9GZR5 314 aa10.71□□□□□ -0.7
SKA1-201ENST00000285116 R3HDMLQ9H3Y0 253 aa10.71□□□□□ -0.7
SKA1-201ENST00000285116 ZC3H7BQ9UGR2 993 aaKnown RBP10.71□□□□□ -0.7
SKA1-201ENST00000285116 SOX13Q9UN79 622 aa10.71□□□□□ -0.7
SKA1-201ENST00000285116 PRUNE2Q8WUY3 3088 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 SDR42E2A6NKP2 422 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 MYL4P12829 197 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 P4HA1P13674 534 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 ALOX15P16050 662 aaPredicted RBP10.7□□□□□ -0.7
SKA1-201ENST00000285116 RPL5P46777 297 aaKnown RBP10.7□□□□□ -0.7
SKA1-201ENST00000285116 TFAMQ00059 246 aaKnown RBP10.7□□□□□ -0.7
SKA1-201ENST00000285116 MSLNQ13421 630 aaPredicted RBP10.7□□□□□ -0.7
SKA1-201ENST00000285116 ATF7IP2Q5U623 682 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 LCLAT1Q6UWP7 414 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 ZBTB33Q86T24 672 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 CDKL3Q8IVW4 592 aaPredicted RBP10.7□□□□□ -0.7
SKA1-201ENST00000285116 SLC25A41Q8N5S1 370 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 PQLC3Q8N755 202 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 JADE3Q92613 823 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 ADPGKQ9BRR6 497 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 XAB2Q9HCS7 855 aaKnown RBP10.7□□□□□ -0.7
SKA1-201ENST00000285116 PICK1Q9NRD5 415 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 THAP1Q9NVV9 213 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 A0A088AWK7 358 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 DCAF8L1A6NGE4 600 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 APOL1O14791 398 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 OR6B1O95007 311 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 MLNP12872 115 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 CD19P15391 556 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 L1CAMP32004 1257 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 SLC26A2P50443 739 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 CDH6P55285 790 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 BTKQ06187 659 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 TAF5Q15542 800 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 MDH1BQ5I0G3 518 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 UGT2A3Q6UWM9 527 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 CRLF3Q8IUI8 442 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 EMC1Q8N766 993 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 GSTCDQ8NEC7 633 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 HSPH1Q92598 858 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 MAML3Q96JK9 1138 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 SIGLEC10Q96LC7 697 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 PRICKLE1Q96MT3 831 aaPredicted RBP10.7□□□□□ -0.7
SKA1-201ENST00000285116 WRNIP1Q96S55 665 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 EBNA1BP2Q99848 306 aaKnown RBP10.7□□□□□ -0.7
SKA1-201ENST00000285116 CALN1Q9BXU9 219 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 ASB7Q9H672 318 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 GBA2Q9HCG7 927 aaPredicted RBP10.7□□□□□ -0.7
SKA1-201ENST00000285116 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.7□□□□□ -0.7
SKA1-201ENST00000285116 MOCS1Q9NZB8 636 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 PCDHGA4Q9Y5G9 962 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 PCDHA11Q9Y5I1 949 aa10.7□□□□□ -0.7
SKA1-201ENST00000285116 STRNO43815 780 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 PEX1O43933 1283 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 SCNN1AP37088 669 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 NR2C2P49116 596 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 AQP4P55087 323 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 SULT2A1Q06520 285 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 DLG1Q12959 904 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 LRRC36Q1X8D7 754 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 HSP90AA5PQ58FG0 334 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 CES4AQ5XG92 561 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 TRNP1Q6NT89 227 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 SCARA5Q6ZMJ2 495 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 ZNF534Q76KX8 674 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 ARID3BQ8IVW6 561 aaPredicted RBP10.69□□□□□ -0.7
SKA1-201ENST00000285116 ALDH16A1Q8IZ83 802 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 C1orf127Q8N9H9 656 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 GDPD5Q8WTR4 605 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 TCHPQ9BT92 498 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 IFT122Q9HBG6 1241 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 TIMMDC1Q9NPL8 285 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 RAB6BQ9NRW1 208 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 RHBDL2Q9NX52 303 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms