RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 F8W031 263 aaPredicted RBP2.89□□□□□ -1.95
CHD1-201ENST00000284049 CSPG5O95196 566 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 KIF20AO95235 890 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 CER1O95813 267 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 EOMESO95936 686 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 PRLP01236 227 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 TFRCP02786 760 aaKnown RBP2.89□□□□□ -1.95
CHD1-201ENST00000284049 ACVR2AP27037 513 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 THBS4P35443 961 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 NRIP1P48552 1158 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 NPEPPSP55786 919 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 LRRC74AQ0VAA2 488 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 TCERG1LQ5VWI1 586 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 AFMIDQ63HM1 303 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 MFSD5Q6N075 450 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 IL27RAQ6UWB1 636 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 ANKRD13BQ86YJ7 626 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 CLIC6Q96NY7 704 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 SLC12A9Q9BXP2 914 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 ABHD16BQ9H3Z7 469 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 SNTG1Q9NSN8 517 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 SMG5Q9UPR3 1016 aaKnown RBP2.89□□□□□ -1.95
CHD1-201ENST00000284049 CAPN7Q9Y6W3 813 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 TRPM3Q9HCF6 1732 aaPredicted RBP2.89□□□□□ -1.95
CHD1-201ENST00000284049 ARPC4-TTLL3A0A0A6YYG9 625 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 TMEM233B4DJY2 109 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 ZNF205O95201 554 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 LTA4HP09960 611 aaKnown RBP2.89□□□□□ -1.95
CHD1-201ENST00000284049 GYPEP15421 78 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 ZNF37AP17032 561 aaPredicted RBP2.89□□□□□ -1.95
CHD1-201ENST00000284049 PRKCAP17252 672 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 CPT2P23786 658 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 ARL1P40616 181 aaPredicted RBP2.89□□□□□ -1.95
CHD1-201ENST00000284049 PPP3CAQ08209 521 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 CYP4F3Q08477 520 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 C16orf87Q6PH81 154 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 KDELC1Q6UW63 502 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 ATG14Q6ZNE5 492 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 OR56A3Q8NH54 315 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 BICD2Q8TD16 824 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 SPXQ9BT56 116 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 CARS2Q9HA77 564 aaKnown RBP2.89□□□□□ -1.95
CHD1-201ENST00000284049 KCTD5Q9NXV2 234 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 ASH2LQ9UBL3 628 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 CTNNA3Q9UI47 895 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 DUSP12Q9UNI6 340 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 SLC8A2Q9UPR5 921 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 CDYLQ9Y232 598 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 AKAP12Q02952 1782 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 TMEM2Q9UHN6 1383 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 SPAG9O60271 1321 aaKnown RBP2.89□□□□□ -1.95
CHD1-201ENST00000284049 CPSF1Q10570 1443 aaKnown RBP2.89□□□□□ -1.95
CHD1-201ENST00000284049 LOC100509620A0A075B734 347 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 LRRC53A6NM62 1247 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 POLRMTO00411 1230 aaKnown RBP2.89□□□□□ -1.95
CHD1-201ENST00000284049 RIPK2O43353 540 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 OPHN1O60890 802 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 TULP3O75386 442 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 WBP4O75554 376 aaKnown RBP2.89□□□□□ -1.95
CHD1-201ENST00000284049 RAD17O75943 681 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 ALX3O95076 343 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 LMNAP02545 664 aaKnown RBP2.89□□□□□ -1.95
CHD1-201ENST00000284049 FYNP06241 537 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 RPL7AP62424 266 aaKnown RBP2.89□□□□□ -1.95
CHD1-201ENST00000284049 TSTA3Q13630 321 aaPredicted RBP2.89□□□□□ -1.95
CHD1-201ENST00000284049 PPP2R5BQ15173 497 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 RAP1GAP2Q684P5 730 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 MAMDC4Q6UXC1 1216 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 CPOQ8IVL8 374 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 ADGRF2Q8IZF7 708 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 NETO1Q8TDF5 533 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 TFAP2CQ92754 450 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 GFM2Q969S9 779 aaKnown RBP2.89□□□□□ -1.95
CHD1-201ENST00000284049 CARD6Q9BX69 1037 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 SLC5A7Q9GZV3 580 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 GSTO2Q9H4Y5 243 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 XPR1Q9UBH6 696 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 ENTPD2Q9Y5L3 495 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.89□□□□□ -1.95
CHD1-201ENST00000284049 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.89□□□□□ -1.95
CHD1-201ENST00000284049 SAC3D1A6NKF1 404 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 RRP9O43818 475 aaKnown RBP2.89□□□□□ -1.95
CHD1-201ENST00000284049 DEAF1O75398 565 aaPredicted RBP2.89□□□□□ -1.95
CHD1-201ENST00000284049 SCGB2A1O75556 95 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 CNPP09543 421 aaKnown RBP2.89□□□□□ -1.95
CHD1-201ENST00000284049 FAHP16930 419 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 EDNRBP24530 442 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 PSMB10P40306 273 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 SKIV2L2P42285 1042 aaKnown RBP2.89□□□□□ -1.95
CHD1-201ENST00000284049 GALK2Q01415 458 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 TFAP4Q01664 338 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 AIMP2Q13155 320 aaKnown RBP2.89□□□□□ -1.95
CHD1-201ENST00000284049 CTBP1Q13363 440 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 GARNL3Q5VVW2 1013 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 CACNA2D4Q7Z3S7 1137 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 IQUBQ8NA54 791 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 GLIS1Q8NBF1 620 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 MNS1Q8NEH6 495 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 RFWD2Q8NHY2 731 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 FBXO30Q8TB52 745 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms