RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 RECQL5O94762 991 aaPredicted RBP8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 CASP4P49662 377 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 C10orf120Q5SQS8 335 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 NEK5Q6P3R8 708 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 MOXD1Q6UVY6 613 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 SLFN11Q7Z7L1 901 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 CCDC36Q8IYA8 594 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 EEF1AKMT1Q8WVE0 214 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 MYLPFQ96A32 169 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 RNF145Q96MT1 663 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 GPR101Q96P66 508 aaPredicted RBP8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 SEPT5Q99719 369 aaPredicted RBP8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 CCDC28BQ9BUN5 200 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 ACTR8Q9H981 624 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 TMEM51Q9NW97 253 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 TRPM5Q9NZQ8 1165 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 C19orf81C9J6K1 198 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 F5H5T6 163 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 CYP1A1P04798 512 aaPredicted RBP8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 MYL4P12829 197 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 HOXB6P17509 224 aaKnown RBP8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 OXCT1P55809 520 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 FRG1Q14331 258 aaKnown RBP8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 NR1D2Q14995 579 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 OTUD3Q5T2D3 398 aaPredicted RBP8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 TRIM48Q8IWZ4 208 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 LRRC17Q8N6Y2 441 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 ZNF398Q8TD17 642 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 FICDQ9BVA6 458 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 PLA2G12BQ9BX93 195 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 PRDM16Q9HAZ2 1276 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 MIEF1Q9NQG6 463 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 DDIT4Q9NX09 232 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 RRN3P2A6NIE6 340 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 SGPL1O95470 568 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 ODC1P11926 461 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 CYP11B1P15538 503 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 ALDH5A1P51649 535 aaPredicted RBP8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 ZNF846Q147U1 533 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 PKN1Q16512 942 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 PRR5LQ6MZQ0 368 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 RBM43Q6ZSC3 357 aaKnown RBP8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 TMC3Q7Z5M5 1100 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 ZNF513Q8N8E2 541 aaPredicted RBP8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 FAM81AQ8TBF8 368 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 AENQ8WTP8 325 aaKnown RBP8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 MYDGFQ969H8 173 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 ZKSCAN4Q969J2 545 aaPredicted RBP8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 SMAD5Q99717 465 aaKnown RBP8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 PDCD10Q9BUL8 212 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 DCLK3Q9C098 648 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 LIMD1Q9UGP4 676 aa8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 CHORDC1Q9UHD1 332 aaPredicted RBP8.92□□□□□ -0.98
SCUBE3-201ENST00000274938 KDM5CP41229 1560 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 KIF21AQ7Z4S6 1674 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 NCF1BA6NI72 391 aaPredicted RBP8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 NCF1CA8MVU1 366 aaPredicted RBP8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 MYCP01106 439 aaPredicted RBP8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 NCF1P14598 390 aaPredicted RBP8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 SLC25A24Q6NUK1 477 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 GPRASP2Q96D09 838 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 GRIP2Q9C0E4 1043 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 NEK6Q9HC98 313 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 A1CFQ9NQ94 594 aaKnown RBP8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 GDF3Q9NR23 364 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 TMEM216Q9P0N5 145 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 MED14O60244 1454 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 ARHGEF40Q8TER5 1519 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 SAMD9LQ8IVG5 1584 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 EGFRP00533 1210 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 GRK4P32298 578 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 ZNF284Q2VY69 593 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 NOTUMQ6P988 496 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 TSPAN14Q8NG11 270 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 PRCCQ92733 491 aaPredicted RBP8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 S100A1P23297 94 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 HALP42357 657 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 ALDH1A3P47895 512 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 NEK3P51956 506 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 ZNF844Q08AG5 666 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 CDH17Q12864 832 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 CDH18Q13634 790 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 ARHGAP15Q53QZ3 475 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 CCDC157Q569K6 752 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 TCHHL1Q5QJ38 904 aaPredicted RBP8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 GJB7Q6PEY0 223 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 GLB1LQ6UWU2 654 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 SFRP1Q8N474 314 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 TEKT5Q96M29 485 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 Q96MT0 163 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 MLPHQ9BV36 600 aaPredicted RBP8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 SCUBE2Q9NQ36 999 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 SRP68Q9UHB9 627 aaKnown RBP8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 DMGDHQ9UI17 866 aaKnown RBP8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 STOML2Q9UJZ1 356 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 PCDHA3Q9Y5H8 950 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 ACTL7BQ9Y614 415 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 FLT1P17948 1338 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 CNTNAP5Q8WYK1 1306 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 FOXN3O00409 490 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms