RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 GMIPQ9P107 970 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 MTRRQ9UBK8 725 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 CDY1Q9Y6F8 540 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 ABHD14A-ACY1A0A1B0GW23 586 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 EEF2KO00418 725 aaKnown RBP12.54□□□□□ -0.4
SDE2-201ENST00000272091 KCNN4O15554 427 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 BANF1O75531 89 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 CPB1P15086 417 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 ATF6P18850 670 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 ARL4AP40617 200 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 PAFAH1B3Q15102 231 aaKnown RBP12.54□□□□□ -0.4
SDE2-201ENST00000272091 KCNT2Q6UVM3 1135 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 ANKS3Q6ZW76 656 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 UHMK1Q8TAS1 419 aaKnown RBP12.54□□□□□ -0.4
SDE2-201ENST00000272091 RUFY1Q96T51 708 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 PRDM5Q9NQX1 630 aaPredicted RBP12.54□□□□□ -0.4
SDE2-201ENST00000272091 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.54□□□□□ -0.4
SDE2-201ENST00000272091 H3BRJ5 948 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 F9P00740 461 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 XRCC4Q13426 336 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 MSS51Q4VC12 460 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 SLC45A4Q5BKX6 768 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 KCTD16Q68DU8 428 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 FAM117BQ6P1L5 589 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 NPWQ8N729 165 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 WDCPQ9H6R7 721 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 SHOC2Q9UQ13 582 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 MRPL42Q9Y6G3 142 aaKnown RBP12.54□□□□□ -0.4
SDE2-201ENST00000272091 ZFXP17010 805 aaPredicted RBP12.54□□□□□ -0.4
SDE2-201ENST00000272091 STIP1P31948 543 aaKnown RBP12.54□□□□□ -0.4
SDE2-201ENST00000272091 NR2C2P49116 596 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 KCNJ11Q14654 390 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 PKN2Q16513 984 aaKnown RBP12.54□□□□□ -0.4
SDE2-201ENST00000272091 FNBP1LQ5T0N5 605 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 BTBD8Q5XKL5 378 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 SLC8B1Q6J4K2 584 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 TRMT10CQ7L0Y3 403 aaKnown RBP12.54□□□□□ -0.4
SDE2-201ENST00000272091 C16orf59Q7L2K0 433 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 FBXO22Q8NEZ5 403 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 ADAM21Q9UKJ8 722 aa12.54□□□□□ -0.4
SDE2-201ENST00000272091 H7C4K7 107 aa12.53□□□□□ -0.4
SDE2-201ENST00000272091 ALDH7A1P49419 539 aaKnown RBP12.53□□□□□ -0.4
SDE2-201ENST00000272091 PRKD1Q15139 912 aaPredicted RBP12.53□□□□□ -0.4
SDE2-201ENST00000272091 KYNUQ16719 465 aa12.53□□□□□ -0.4
SDE2-201ENST00000272091 XPO7Q9UIA9 1087 aaKnown RBP12.53□□□□□ -0.4
SDE2-201ENST00000272091 HCAR3P49019 387 aa12.53□□□□□ -0.4
SDE2-201ENST00000272091 DUSP4Q13115 394 aa12.53□□□□□ -0.4
SDE2-201ENST00000272091 RASIP1Q5U651 963 aa12.53□□□□□ -0.4
SDE2-201ENST00000272091 DENND2CQ68D51 928 aa12.53□□□□□ -0.4
SDE2-201ENST00000272091 PPIL6Q8IXY8 311 aa12.53□□□□□ -0.4
SDE2-201ENST00000272091 SLC39A11Q8N1S5 342 aa12.53□□□□□ -0.4
SDE2-201ENST00000272091 SPPL2BQ8TCT7 592 aa12.53□□□□□ -0.4
SDE2-201ENST00000272091 SPATA17Q96L03 361 aa12.53□□□□□ -0.4
SDE2-201ENST00000272091 RBM15Q96T37 977 aaKnown RBP eCLIP12.53□□□□□ -0.4
SDE2-201ENST00000272091 LGMNQ99538 433 aa12.53□□□□□ -0.4
SDE2-201ENST00000272091 CLSTN3Q9BQT9 956 aa12.53□□□□□ -0.4
SDE2-201ENST00000272091 NYNRINQ9P2P1 1898 aaKnown RBP12.53□□□□□ -0.4
SDE2-201ENST00000272091 GOLGA8MH3BSY2 632 aa12.53□□□□□ -0.4
SDE2-201ENST00000272091 ACSL3O95573 720 aa12.53□□□□□ -0.4
SDE2-201ENST00000272091 TTC4O95801 387 aa12.53□□□□□ -0.4
SDE2-201ENST00000272091 ERCC2P18074 760 aa12.53□□□□□ -0.4
SDE2-201ENST00000272091 TERF2Q15554 542 aa12.53□□□□□ -0.4
SDE2-201ENST00000272091 MFSD5Q6N075 450 aa12.53□□□□□ -0.4
SDE2-201ENST00000272091 MSANTD2Q6P1R3 559 aa12.53□□□□□ -0.4
SDE2-201ENST00000272091 UBE2Q1Q7Z7E8 422 aa12.53□□□□□ -0.4
SDE2-201ENST00000272091 ATP6V1G3Q96LB4 118 aa12.53□□□□□ -0.4
SDE2-201ENST00000272091 SEPT5Q99719 369 aaPredicted RBP12.53□□□□□ -0.4
SDE2-201ENST00000272091 KCNU1A8MYU2 1149 aa12.52□□□□□ -0.4
SDE2-201ENST00000272091 LRIG2O94898 1065 aa12.52□□□□□ -0.4
SDE2-201ENST00000272091 LINC00271P0C7V0 271 aa12.52□□□□□ -0.4
SDE2-201ENST00000272091 USP41Q3LFD5 358 aa12.52□□□□□ -0.4
SDE2-201ENST00000272091 MON1AQ86VX9 555 aa12.52□□□□□ -0.4
SDE2-201ENST00000272091 CDKL3Q8IVW4 592 aaPredicted RBP12.52□□□□□ -0.4
SDE2-201ENST00000272091 CCDC110Q8TBZ0 833 aa12.52□□□□□ -0.4
SDE2-201ENST00000272091 C9orf72Q96LT7 481 aa12.52□□□□□ -0.4
SDE2-201ENST00000272091 KLC2Q9H0B6 622 aa12.52□□□□□ -0.4
SDE2-201ENST00000272091 OR12D3Q9UGF7 316 aa12.52□□□□□ -0.4
SDE2-201ENST00000272091 PLXNA4Q9HCM2 1894 aa12.52□□□□□ -0.4
SDE2-201ENST00000272091 GOLGA6CA6NDK9 693 aa12.52□□□□□ -0.41
SDE2-201ENST00000272091 GOLGA6DP0CG33 693 aa12.52□□□□□ -0.41
SDE2-201ENST00000272091 GABPB1Q06547 395 aaPredicted RBP12.52□□□□□ -0.41
SDE2-201ENST00000272091 PSMD5Q16401 504 aa12.52□□□□□ -0.41
SDE2-201ENST00000272091 MGAT5BQ3V5L5 792 aa12.52□□□□□ -0.41
SDE2-201ENST00000272091 SYCP2LQ5T4T6 812 aa12.52□□□□□ -0.41
SDE2-201ENST00000272091 MANEALQ5VSG8 457 aa12.52□□□□□ -0.41
SDE2-201ENST00000272091 NECAB2Q7Z6G3 386 aa12.52□□□□□ -0.41
SDE2-201ENST00000272091 AGGF1Q8N302 714 aaeCLIP12.52□□□□□ -0.41
SDE2-201ENST00000272091 EPS8L3Q8TE67 593 aaKnown RBP12.52□□□□□ -0.41
SDE2-201ENST00000272091 TRIM62Q9BVG3 475 aa12.52□□□□□ -0.41
SDE2-201ENST00000272091 FOXP3Q9BZS1 431 aa12.52□□□□□ -0.41
SDE2-201ENST00000272091 GOLGA6AQ9NYA3 693 aa12.52□□□□□ -0.41
SDE2-201ENST00000272091 BACE2Q9Y5Z0 518 aa12.52□□□□□ -0.41
SDE2-201ENST00000272091 CFAP69A5D8W1 941 aa12.52□□□□□ -0.41
SDE2-201ENST00000272091 SEC24AO95486 1093 aa12.52□□□□□ -0.41
SDE2-201ENST00000272091 MAGEA4P43358 317 aa12.52□□□□□ -0.41
SDE2-201ENST00000272091 DENND5BQ6ZUT9 1274 aa12.52□□□□□ -0.41
SDE2-201ENST00000272091 HOOK3Q86VS8 718 aa12.52□□□□□ -0.41
SDE2-201ENST00000272091 COLGALT1Q8NBJ5 622 aa12.52□□□□□ -0.41
SDE2-201ENST00000272091 SLC39A13Q96H72 371 aa12.52□□□□□ -0.41
SDE2-201ENST00000272091 TMEM109Q9BVC6 243 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms